Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC10.59□□□□□ -0.71
SMARCA2P51531 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA2P51531 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA2P51531 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA2P51531 AL731556.1-201ENST00000394628 3711 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA2P51531 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 RPS4XP5-201ENST00000419038 768 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 VDAC1P2-201ENST00000423609 850 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC10.59□□□□□ -0.71
SMARCA2P51531 EIF1P7-201ENST00000487533 337 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA2P51531 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
SMARCA2P51531 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 TXNP4-201ENST00000575018 310 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 MIR8089-201ENST00000620165 82 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 MIR6837-201ENST00000620884 64 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 AC136428.4-201ENST00000634254 1155 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA2P51531 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 AC013488.1-201ENST00000526618 1838 ntBASIC10.59□□□□□ -0.71
SMARCA2P51531 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA2P51531 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.71
SMARCA2P51531 AC110597.1-201ENST00000562669 3176 ntBASIC10.58□□□□□ -0.72
SMARCA2P51531 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SMARCA2P51531 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SMARCA2P51531 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA2P51531 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC10.58□□□□□ -0.72
SMARCA2P51531 AC021146.10-201ENST00000515628 706 ntBASIC10.58□□□□□ -0.72
SMARCA2P51531 OR7E158P-201ENST00000524483 910 ntBASIC10.58□□□□□ -0.72
SMARCA2P51531 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA2P51531 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA2P51531 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SMARCA2P51531 DCN-210ENST00000547568 823 ntTSL 3 BASIC10.58□□□□□ -0.72
SMARCA2P51531 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC10.58□□□□□ -0.72
SMARCA2P51531 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC10.58□□□□□ -0.72
SMARCA2P51531 AL049539.1-201ENST00000611964 459 ntBASIC10.58□□□□□ -0.72
SMARCA2P51531 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
SMARCA2P51531 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA2P51531 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
SMARCA2P51531 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA2P51531 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC10.58□□□□□ -0.72
SMARCA2P51531 AC023421.1-201ENST00000590535 1785 ntBASIC10.58□□□□□ -0.72
SMARCA2P51531 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC10.58□□□□□ -0.72
SMARCA2P51531 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SMARCA2P51531 FO393409.1-201ENST00000399325 1372 ntBASIC10.58□□□□□ -0.72
SMARCA2P51531 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SMARCA2P51531 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC10.57□□□□□ -0.72
SMARCA2P51531 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 U8.4-201ENST00000363626 134 ntBASIC10.57□□□□□ -0.72
SMARCA2P51531 MIR550A3-201ENST00000390735 95 ntBASIC10.57□□□□□ -0.72
SMARCA2P51531 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC10.57□□□□□ -0.72
SMARCA2P51531 AC005297.1-201ENST00000444765 862 ntBASIC10.57□□□□□ -0.72
SMARCA2P51531 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC10.57□□□□□ -0.72
SMARCA2P51531 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
SMARCA2P51531 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC10.57□□□□□ -0.72
SMARCA2P51531 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC10.57□□□□□ -0.72
SMARCA2P51531 PPATP2-201ENST00000605635 508 ntBASIC10.57□□□□□ -0.72
SMARCA2P51531 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC10.57□□□□□ -0.72
SMARCA2P51531 AP001784.1-201ENST00000624107 428 ntBASIC10.57□□□□□ -0.72
SMARCA2P51531 OR11H2-202ENST00000641517 1085 ntBASIC10.57□□□□□ -0.72
SMARCA2P51531 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC10.57□□□□□ -0.72
SMARCA2P51531 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 FO082842.1-201ENST00000423552 1370 ntBASIC10.57□□□□□ -0.72
SMARCA2P51531 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC10.57□□□□□ -0.72
SMARCA2P51531 AFP-201ENST00000226359 1914 ntTSL 5 BASIC10.57□□□□□ -0.72
SMARCA2P51531 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.57□□□□□ -0.72
SMARCA2P51531 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC10.57□□□□□ -0.72
SMARCA2P51531 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC10.57□□□□□ -0.72
SMARCA2P51531 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SMARCA2P51531 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC10.56□□□□□ -0.72
SMARCA2P51531 SRRM1P3-201ENST00000426911 2678 ntBASIC10.56□□□□□ -0.72
SMARCA2P51531 TPT1-204ENST00000379060 764 ntTSL 5 BASIC10.56□□□□□ -0.72
SMARCA2P51531 RBMY2KP-201ENST00000418221 992 ntBASIC10.56□□□□□ -0.72
SMARCA2P51531 AC099677.3-201ENST00000427081 395 ntBASIC10.56□□□□□ -0.72
SMARCA2P51531 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC10.56□□□□□ -0.72
SMARCA2P51531 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SMARCA2P51531 RPL7AP6-201ENST00000477943 801 ntBASIC10.56□□□□□ -0.72
SMARCA2P51531 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC10.56□□□□□ -0.72
SMARCA2P51531 AL121612.2-201ENST00000612261 482 ntBASIC10.56□□□□□ -0.72
SMARCA2P51531 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SMARCA2P51531 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC10.56□□□□□ -0.72
SMARCA2P51531 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms