Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC245100.2-201ENST00000454544 1679 ntBASIC5.3□□□□□ -1.56
CDX1P47902 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.3□□□□□ -1.56
CDX1P47902 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDX1P47902 AC020658.2-201ENST00000559030 4020 ntBASIC5.3□□□□□ -1.56
CDX1P47902 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDX1P47902 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDX1P47902 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.3□□□□□ -1.56
CDX1P47902 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDX1P47902 AC010624.4-201ENST00000597606 1351 ntBASIC5.29□□□□□ -1.56
CDX1P47902 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.29□□□□□ -1.56
CDX1P47902 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.29□□□□□ -1.56
CDX1P47902 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.29□□□□□ -1.56
CDX1P47902 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.29□□□□□ -1.56
CDX1P47902 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDX1P47902 GNG5P2-201ENST00000372054 207 ntBASIC5.29□□□□□ -1.56
CDX1P47902 MT-RNR1-201ENST00000389680 954 ntBASIC5.29□□□□□ -1.56
CDX1P47902 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDX1P47902 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 AC234781.4-201ENST00000419384 244 ntBASIC5.29□□□□□ -1.56
CDX1P47902 KIF4CP-201ENST00000422742 1279 ntBASIC5.29□□□□□ -1.56
CDX1P47902 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.29□□□□□ -1.56
CDX1P47902 TRIM60P13-201ENST00000432350 1283 ntBASIC5.29□□□□□ -1.56
CDX1P47902 NDUFA5P1-201ENST00000433858 341 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AL138787.1-202ENST00000437804 898 ntBASIC5.29□□□□□ -1.56
CDX1P47902 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.29□□□□□ -1.56
CDX1P47902 AL034369.1-201ENST00000453808 477 ntBASIC5.29□□□□□ -1.56
CDX1P47902 MEF2AP1-201ENST00000454867 863 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.29□□□□□ -1.56
CDX1P47902 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDX1P47902 SNORA58-201ENST00000505219 137 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 AC021220.1-201ENST00000507445 630 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AC010442.1-201ENST00000515583 816 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.29□□□□□ -1.56
CDX1P47902 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.29□□□□□ -1.56
CDX1P47902 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.29□□□□□ -1.56
CDX1P47902 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.29□□□□□ -1.56
CDX1P47902 SETP17-201ENST00000534163 817 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.29□□□□□ -1.56
CDX1P47902 HMGN2P47-201ENST00000559378 272 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 AL590032.1-201ENST00000604920 252 ntBASIC5.29□□□□□ -1.56
CDX1P47902 MIR6849-201ENST00000618543 69 ntBASIC5.29□□□□□ -1.56
CDX1P47902 CLUHP10-201ENST00000631979 980 ntBASIC5.29□□□□□ -1.56
CDX1P47902 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.29□□□□□ -1.56
CDX1P47902 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.29□□□□□ -1.56
CDX1P47902 OR51C1P-202ENST00000641159 1444 ntBASIC5.29□□□□□ -1.56
CDX1P47902 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDX1P47902 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.29□□□□□ -1.56
CDX1P47902 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
CDX1P47902 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDX1P47902 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.29□□□□□ -1.56
CDX1P47902 AC119674.1-213ENST00000641177 1386 ntBASIC5.29□□□□□ -1.56
CDX1P47902 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.28□□□□□ -1.56
CDX1P47902 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDX1P47902 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CDX1P47902 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CDX1P47902 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDX1P47902 AC105749.1-201ENST00000631338 2008 ntBASIC5.28□□□□□ -1.56
CDX1P47902 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDX1P47902 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.28□□□□□ -1.56
CDX1P47902 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDX1P47902 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDX1P47902 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.28□□□□□ -1.56
CDX1P47902 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDX1P47902 AC010894.1-201ENST00000313760 361 ntBASIC5.28□□□□□ -1.56
CDX1P47902 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CDX1P47902 RNU1-5P-201ENST00000362684 144 ntBASIC5.28□□□□□ -1.56
CDX1P47902 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDX1P47902 AL033519.1-201ENST00000407266 307 ntBASIC5.28□□□□□ -1.56
CDX1P47902 CYCSP17-201ENST00000407870 315 ntBASIC5.28□□□□□ -1.56
CDX1P47902 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.28□□□□□ -1.56
CDX1P47902 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.28□□□□□ -1.56
CDX1P47902 AL663061.1-201ENST00000416625 580 ntBASIC5.28□□□□□ -1.56
CDX1P47902 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.28□□□□□ -1.56
CDX1P47902 AL354868.1-201ENST00000417077 482 ntBASIC5.28□□□□□ -1.56
CDX1P47902 DPPA2P2-201ENST00000418220 897 ntBASIC5.28□□□□□ -1.56
CDX1P47902 AC006509.1-201ENST00000420788 634 ntBASIC5.28□□□□□ -1.56
CDX1P47902 CDC42P6-201ENST00000421246 576 ntBASIC5.28□□□□□ -1.56
CDX1P47902 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.28□□□□□ -1.56
CDX1P47902 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms