Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL139041.1-201ENST00000605480 610 ntBASIC6.52□□□□□ -1.37
MMP13P45452 AC089999.3-201ENST00000622440 577 ntBASIC6.52□□□□□ -1.37
MMP13P45452 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
MMP13P45452 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
MMP13P45452 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.52□□□□□ -1.37
MMP13P45452 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 AL359976.1-201ENST00000418655 3528 ntBASIC6.51□□□□□ -1.37
MMP13P45452 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.51□□□□□ -1.37
MMP13P45452 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP13P45452 AC027575.3-201ENST00000583058 2747 ntBASIC6.51□□□□□ -1.37
MMP13P45452 MAPK10-287ENST00000641217 3037 ntBASIC6.51□□□□□ -1.37
MMP13P45452 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP13P45452 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
MMP13P45452 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
MMP13P45452 RNA5SP478-201ENST00000364657 115 ntBASIC6.51□□□□□ -1.37
MMP13P45452 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.51□□□□□ -1.37
MMP13P45452 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP13P45452 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 AC092651.1-201ENST00000426110 312 ntBASIC6.51□□□□□ -1.37
MMP13P45452 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.51□□□□□ -1.37
MMP13P45452 COX4I1P2-201ENST00000447446 547 ntBASIC6.51□□□□□ -1.37
MMP13P45452 AL445687.2-201ENST00000458156 728 ntBASIC6.51□□□□□ -1.37
MMP13P45452 RN7SL39P-201ENST00000462264 297 ntBASIC6.51□□□□□ -1.37
MMP13P45452 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
MMP13P45452 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.51□□□□□ -1.37
MMP13P45452 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.51□□□□□ -1.37
MMP13P45452 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.51□□□□□ -1.37
MMP13P45452 AC008429.4-201ENST00000521201 182 ntBASIC6.51□□□□□ -1.37
MMP13P45452 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.51□□□□□ -1.37
MMP13P45452 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.51□□□□□ -1.37
MMP13P45452 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 AC007066.2-202ENST00000566531 914 ntBASIC6.51□□□□□ -1.37
MMP13P45452 ARGFXP2-201ENST00000579304 949 ntBASIC6.51□□□□□ -1.37
MMP13P45452 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.51□□□□□ -1.37
MMP13P45452 AC004223.2-201ENST00000590309 544 ntBASIC6.51□□□□□ -1.37
MMP13P45452 AL589765.6-201ENST00000601909 549 ntBASIC6.51□□□□□ -1.37
MMP13P45452 AC016542.1-201ENST00000608259 493 ntBASIC6.51□□□□□ -1.37
MMP13P45452 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP13P45452 AC093388.1-201ENST00000609166 430 ntBASIC6.51□□□□□ -1.37
MMP13P45452 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.51□□□□□ -1.37
MMP13P45452 HTR1DP1-201ENST00000616500 888 ntBASIC6.51□□□□□ -1.37
MMP13P45452 AP001153.1-201ENST00000641024 338 ntBASIC6.51□□□□□ -1.37
MMP13P45452 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.51□□□□□ -1.37
MMP13P45452 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP13P45452 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.51□□□□□ -1.37
MMP13P45452 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MMP13P45452 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.51□□□□□ -1.37
MMP13P45452 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP13P45452 AC083799.1-201ENST00000366451 910 ntBASIC6.5□□□□□ -1.37
MMP13P45452 AL133260.1-201ENST00000405720 405 ntBASIC6.5□□□□□ -1.37
MMP13P45452 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.5□□□□□ -1.37
MMP13P45452 RN7SKP38-201ENST00000410782 309 ntBASIC6.5□□□□□ -1.37
MMP13P45452 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.5□□□□□ -1.37
MMP13P45452 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP13P45452 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP13P45452 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP13P45452 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.5□□□□□ -1.37
MMP13P45452 AC002127.1-201ENST00000421305 225 ntBASIC6.5□□□□□ -1.37
MMP13P45452 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.5□□□□□ -1.37
MMP13P45452 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP13P45452 HSFY7P-201ENST00000432672 318 ntBASIC6.5□□□□□ -1.37
MMP13P45452 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP13P45452 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
MMP13P45452 HSFY8P-201ENST00000437934 318 ntBASIC6.5□□□□□ -1.37
MMP13P45452 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.5□□□□□ -1.37
MMP13P45452 GTF2IP14-201ENST00000441415 586 ntBASIC6.5□□□□□ -1.37
MMP13P45452 AL451063.1-201ENST00000450164 1133 ntBASIC6.5□□□□□ -1.37
MMP13P45452 HSFY5P-201ENST00000453726 309 ntBASIC6.5□□□□□ -1.37
MMP13P45452 RPS27AP3-201ENST00000453803 454 ntBASIC6.5□□□□□ -1.37
MMP13P45452 RPS7P10-201ENST00000464254 603 ntBASIC6.5□□□□□ -1.37
MMP13P45452 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP13P45452 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP13P45452 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.5□□□□□ -1.37
MMP13P45452 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP13P45452 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms