Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TPRX1P1-201ENST00000557620 319 ntBASIC5.19□□□□□ -1.58
CEACAM3P40198 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CEACAM3P40198 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.19□□□□□ -1.58
CEACAM3P40198 AC137695.1-201ENST00000604126 489 ntBASIC5.19□□□□□ -1.58
CEACAM3P40198 NDUFB9P1-201ENST00000604683 510 ntBASIC5.19□□□□□ -1.58
CEACAM3P40198 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.19□□□□□ -1.58
CEACAM3P40198 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.19□□□□□ -1.58
CEACAM3P40198 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
CEACAM3P40198 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CEACAM3P40198 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CEACAM3P40198 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CEACAM3P40198 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CEACAM3P40198 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CEACAM3P40198 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CEACAM3P40198 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CEACAM3P40198 NEK2P2-201ENST00000438441 1338 ntBASIC5.19□□□□□ -1.58
CEACAM3P40198 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CEACAM3P40198 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.19□□□□□ -1.58
CEACAM3P40198 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CEACAM3P40198 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CEACAM3P40198 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.19□□□□□ -1.58
CEACAM3P40198 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CEACAM3P40198 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CEACAM3P40198 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 UBE2V1P14-201ENST00000415815 558 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 RPL21P50-201ENST00000417698 477 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 IGLV3-4-201ENST00000432300 244 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.18□□□□□ -1.58
CEACAM3P40198 AC007383.1-201ENST00000445875 636 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 VPS25P1-201ENST00000455691 508 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 AC044810.1-201ENST00000480271 711 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 AC117500.1-201ENST00000497352 755 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.18□□□□□ -1.58
CEACAM3P40198 NACAP5-201ENST00000509863 636 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 RNA5SP418-201ENST00000515951 117 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 SNORA74.1-201ENST00000516320 180 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 KCTD9P4-201ENST00000526766 1166 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 AP005639.1-201ENST00000526939 192 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 AL133399.1-201ENST00000527476 298 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.18□□□□□ -1.58
CEACAM3P40198 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.18□□□□□ -1.58
CEACAM3P40198 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 MIR7159-201ENST00000620587 66 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 AL359976.1-201ENST00000418655 3528 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 SSXP3-201ENST00000442971 1300 ntBASIC5.18□□□□□ -1.58
CEACAM3P40198 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CEACAM3P40198 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.18□□□□□ -1.58
CEACAM3P40198 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.18□□□□□ -1.58
CEACAM3P40198 IMMTP1-201ENST00000435590 2219 ntBASIC5.17□□□□□ -1.58
CEACAM3P40198 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
CEACAM3P40198 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.17□□□□□ -1.58
CEACAM3P40198 AC093671.1-201ENST00000624981 2929 ntBASIC5.17□□□□□ -1.58
CEACAM3P40198 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CEACAM3P40198 AC011369.2-201ENST00000624423 1567 ntBASIC5.17□□□□□ -1.58
CEACAM3P40198 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CEACAM3P40198 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CEACAM3P40198 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CEACAM3P40198 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.17□□□□□ -1.58
CEACAM3P40198 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CEACAM3P40198 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CEACAM3P40198 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CEACAM3P40198 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.17□□□□□ -1.58
CEACAM3P40198 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms