Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.98□□□□□ -1.29
HOXA13P31271 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.98□□□□□ -1.29
HOXA13P31271 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
HOXA13P31271 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.98□□□□□ -1.29
HOXA13P31271 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 AL391262.1-201ENST00000556558 1992 ntBASIC6.98□□□□□ -1.29
HOXA13P31271 AOX3P-204ENST00000491025 2107 ntBASIC6.98□□□□□ -1.29
HOXA13P31271 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.98□□□□□ -1.29
HOXA13P31271 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA13P31271 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HOXA13P31271 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HOXA13P31271 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA13P31271 LINC01616-201ENST00000561816 2280 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA13P31271 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA13P31271 SUGT1P2-201ENST00000379452 992 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HOXA13P31271 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.97□□□□□ -1.29
HOXA13P31271 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA13P31271 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 AL022237.1-201ENST00000446663 358 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 Y_RNA.667-201ENST00000516212 107 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 RN7SKP98-201ENST00000517070 156 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.97□□□□□ -1.29
HOXA13P31271 RPA2P1-201ENST00000556557 721 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA13P31271 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA13P31271 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 AP002345.2-201ENST00000609961 904 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AC245014.3-201ENST00000618589 347 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AC087821.1-201ENST00000623639 567 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AC091305.2-201ENST00000624049 1576 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 SNX18P12-201ENST00000624821 759 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AL357562.1-201ENST00000624911 609 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 AC003992.1-201ENST00000635364 557 ntBASIC6.97□□□□□ -1.29
HOXA13P31271 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA13P31271 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA13P31271 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HOXA13P31271 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA13P31271 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA13P31271 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA13P31271 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HOXA13P31271 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA13P31271 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA13P31271 AC009831.5-201ENST00000624000 3189 ntBASIC6.96□□□□□ -1.29
HOXA13P31271 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA13P31271 SYT14P1-202ENST00000600441 1448 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA13P31271 OR7E25P-201ENST00000344844 931 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
HOXA13P31271 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA13P31271 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA13P31271 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA13P31271 CDY8P-201ENST00000428380 1279 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 OR6C71P-201ENST00000432580 913 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA13P31271 VN1R96P-201ENST00000446052 858 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 CDY20P-201ENST00000447528 1279 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA13P31271 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA13P31271 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.96□□□□□ -1.3
HOXA13P31271 AC090568.1-201ENST00000509499 856 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 AC114781.3-201ENST00000512083 142 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 RNA5SP438-201ENST00000516561 112 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 AC060775.1-201ENST00000518241 520 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.96□□□□□ -1.3
HOXA13P31271 AP003396.4-201ENST00000527574 265 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
HOXA13P31271 AC020916.2-201ENST00000591242 360 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.96□□□□□ -1.3
HOXA13P31271 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA13P31271 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA13P31271 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA13P31271 AL034408.1-201ENST00000637712 664 ntBASIC6.96□□□□□ -1.3
HOXA13P31271 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA13P31271 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.3
HOXA13P31271 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms