Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.58□□□□□ -1.36
MMP8P22894 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.58□□□□□ -1.36
MMP8P22894 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.58□□□□□ -1.36
MMP8P22894 AC090651.1-201ENST00000567865 634 ntBASIC6.58□□□□□ -1.36
MMP8P22894 AC020978.7-201ENST00000575953 1187 ntBASIC6.58□□□□□ -1.36
MMP8P22894 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.58□□□□□ -1.36
MMP8P22894 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 AC011891.2-201ENST00000604949 397 ntBASIC6.58□□□□□ -1.36
MMP8P22894 AL122023.1-201ENST00000622847 530 ntBASIC6.58□□□□□ -1.36
MMP8P22894 AC018659.2-201ENST00000624690 715 ntBASIC6.58□□□□□ -1.36
MMP8P22894 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.58□□□□□ -1.36
MMP8P22894 OR7A1P-202ENST00000641542 1158 ntBASIC6.58□□□□□ -1.36
MMP8P22894 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.58□□□□□ -1.36
MMP8P22894 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 TMCC1P1-201ENST00000518897 1980 ntBASIC6.58□□□□□ -1.36
MMP8P22894 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
MMP8P22894 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MMP8P22894 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
MMP8P22894 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MMP8P22894 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MMP8P22894 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MMP8P22894 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP8P22894 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP8P22894 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MMP8P22894 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 Y_RNA.110-201ENST00000363220 99 ntBASIC6.57□□□□□ -1.36
MMP8P22894 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MMP8P22894 TRAV35-201ENST00000390462 330 ntBASIC6.57□□□□□ -1.36
MMP8P22894 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 AL607077.1-201ENST00000401718 499 ntBASIC6.57□□□□□ -1.36
MMP8P22894 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP8P22894 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 PPIAP10-201ENST00000438675 458 ntBASIC6.57□□□□□ -1.36
MMP8P22894 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP8P22894 SNX18P24-201ENST00000505249 671 ntBASIC6.57□□□□□ -1.36
MMP8P22894 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.57□□□□□ -1.36
MMP8P22894 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP8P22894 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 NPM1P45-201ENST00000583151 559 ntBASIC6.57□□□□□ -1.36
MMP8P22894 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP8P22894 AC020915.5-201ENST00000596836 964 ntBASIC6.57□□□□□ -1.36
MMP8P22894 NDUFB9P1-201ENST00000604683 510 ntBASIC6.57□□□□□ -1.36
MMP8P22894 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
MMP8P22894 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP8P22894 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP8P22894 AC114876.1-201ENST00000490962 1366 ntBASIC6.57□□□□□ -1.36
MMP8P22894 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
MMP8P22894 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
MMP8P22894 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.56□□□□□ -1.36
MMP8P22894 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 RNU6-386P-201ENST00000362650 107 ntBASIC6.56□□□□□ -1.36
MMP8P22894 RNU6-819P-201ENST00000364116 107 ntBASIC6.56□□□□□ -1.36
MMP8P22894 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP8P22894 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.56□□□□□ -1.36
MMP8P22894 RN7SKP151-201ENST00000410230 316 ntBASIC6.56□□□□□ -1.36
MMP8P22894 RNA5SP198-201ENST00000410376 127 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms