Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH3P22223 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH3P22223 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 RN7SL552P-201ENST00000462094 276 ntBASIC6.21□□□□□ -1.42
CDH3P22223 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH3P22223 OR7E22P-201ENST00000478335 1035 ntBASIC6.21□□□□□ -1.42
CDH3P22223 AC106822.1-201ENST00000502647 526 ntBASIC6.21□□□□□ -1.42
CDH3P22223 AC122718.2-201ENST00000505325 591 ntBASIC6.21□□□□□ -1.42
CDH3P22223 AC091965.3-201ENST00000506236 208 ntBASIC6.21□□□□□ -1.42
CDH3P22223 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH3P22223 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 AC024405.1-201ENST00000532521 1042 ntBASIC6.21□□□□□ -1.42
CDH3P22223 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH3P22223 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 AC074141.1-201ENST00000588129 2995 ntBASIC6.21□□□□□ -1.42
CDH3P22223 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH3P22223 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.21□□□□□ -1.42
CDH3P22223 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH3P22223 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.21□□□□□ -1.42
CDH3P22223 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH3P22223 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
CDH3P22223 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
CDH3P22223 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH3P22223 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 AC009120.2-204ENST00000621548 2032 ntBASIC6.21□□□□□ -1.42
CDH3P22223 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 CDY11P-201ENST00000447168 1651 ntBASIC6.2□□□□□ -1.42
CDH3P22223 AC062022.1-201ENST00000451026 1684 ntBASIC6.2□□□□□ -1.42
CDH3P22223 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 AC011369.2-201ENST00000624423 1567 ntBASIC6.2□□□□□ -1.42
CDH3P22223 AC125238.2-201ENST00000430003 1440 ntBASIC6.2□□□□□ -1.42
CDH3P22223 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
CDH3P22223 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 RN7SKP187-201ENST00000365536 330 ntBASIC6.2□□□□□ -1.42
CDH3P22223 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
CDH3P22223 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CDH3P22223 AC002127.1-201ENST00000421305 225 ntBASIC6.2□□□□□ -1.42
CDH3P22223 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH3P22223 EMC3-AS1-205ENST00000438698 534 ntBASIC6.2□□□□□ -1.42
CDH3P22223 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 SNORA58-201ENST00000505219 137 ntBASIC6.2□□□□□ -1.42
CDH3P22223 AC112484.3-201ENST00000505910 329 ntBASIC6.2□□□□□ -1.42
CDH3P22223 RNA5SP441-201ENST00000516809 88 ntBASIC6.2□□□□□ -1.42
CDH3P22223 AC021733.2-201ENST00000518830 497 ntBASIC6.2□□□□□ -1.42
CDH3P22223 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH3P22223 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH3P22223 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH3P22223 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH3P22223 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH3P22223 AC115989.2-201ENST00000578640 563 ntBASIC6.2□□□□□ -1.42
CDH3P22223 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH3P22223 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH3P22223 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH3P22223 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH3P22223 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH3P22223 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH3P22223 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 AC087516.1-201ENST00000561236 2428 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH3P22223 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH3P22223 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 SNORD16-201ENST00000362803 99 ntBASIC6.19□□□□□ -1.42
CDH3P22223 RN7SKP237-201ENST00000364663 301 ntBASIC6.19□□□□□ -1.42
CDH3P22223 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 AL023284.3-201ENST00000407767 334 ntBASIC6.19□□□□□ -1.42
CDH3P22223 RPL21P50-201ENST00000417698 477 ntBASIC6.19□□□□□ -1.42
CDH3P22223 RANP7-201ENST00000418085 644 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AL157884.1-201ENST00000424561 454 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms