Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH1P12830 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CDH1P12830 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.09□□□□□ -1.43
CDH1P12830 NME1P1-201ENST00000420914 382 ntBASIC6.09□□□□□ -1.43
CDH1P12830 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH1P12830 CXCR2P1-202ENST00000443392 1074 ntBASIC6.09□□□□□ -1.43
CDH1P12830 REG1CP-206ENST00000447469 496 ntBASIC6.09□□□□□ -1.43
CDH1P12830 AC009963.4-201ENST00000448535 339 ntBASIC6.09□□□□□ -1.43
CDH1P12830 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.09□□□□□ -1.43
CDH1P12830 RN7SL643P-201ENST00000471845 291 ntBASIC6.09□□□□□ -1.43
CDH1P12830 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH1P12830 CR383656.1-201ENST00000484916 377 ntBASIC6.09□□□□□ -1.43
CDH1P12830 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH1P12830 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH1P12830 RNA5SP206-201ENST00000516703 121 ntBASIC6.09□□□□□ -1.43
CDH1P12830 IGHV4-55-201ENST00000520889 368 ntBASIC6.09□□□□□ -1.43
CDH1P12830 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH1P12830 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH1P12830 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH1P12830 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH1P12830 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.09□□□□□ -1.43
CDH1P12830 WBP1LP12-201ENST00000604449 331 ntBASIC6.09□□□□□ -1.43
CDH1P12830 AC011891.2-201ENST00000604949 397 ntBASIC6.09□□□□□ -1.43
CDH1P12830 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.09□□□□□ -1.43
CDH1P12830 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH1P12830 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH1P12830 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH1P12830 CASC19-246ENST00000641625 1606 ntBASIC6.09□□□□□ -1.43
CDH1P12830 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH1P12830 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH1P12830 AC137056.2-201ENST00000624055 1958 ntBASIC6.09□□□□□ -1.43
CDH1P12830 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH1P12830 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDH1P12830 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDH1P12830 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
CDH1P12830 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDH1P12830 MTND2P12-201ENST00000417560 1252 ntBASIC6.08□□□□□ -1.44
CDH1P12830 AC244453.4-201ENST00000419150 388 ntBASIC6.08□□□□□ -1.44
CDH1P12830 RPL7AP51-201ENST00000422016 760 ntBASIC6.08□□□□□ -1.44
CDH1P12830 OR5W1P-201ENST00000423705 938 ntBASIC6.08□□□□□ -1.44
CDH1P12830 AC112492.2-201ENST00000432774 1030 ntBASIC6.08□□□□□ -1.44
CDH1P12830 AC079922.1-201ENST00000443291 359 ntBASIC6.08□□□□□ -1.44
CDH1P12830 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH1P12830 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.08□□□□□ -1.44
CDH1P12830 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 AC044810.1-201ENST00000480271 711 ntBASIC6.08□□□□□ -1.44
CDH1P12830 RPL29P23-201ENST00000486188 442 ntBASIC6.08□□□□□ -1.44
CDH1P12830 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDH1P12830 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 AP001000.1-201ENST00000526843 742 ntBASIC6.08□□□□□ -1.44
CDH1P12830 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 AC012676.3-201ENST00000614983 479 ntBASIC6.08□□□□□ -1.44
CDH1P12830 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH1P12830 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH1P12830 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CDH1P12830 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CDH1P12830 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH1P12830 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH1P12830 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CDH1P12830 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH1P12830 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH1P12830 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH1P12830 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH1P12830 RNU6-316P-201ENST00000391027 107 ntBASIC6.07□□□□□ -1.44
CDH1P12830 AL157702.1-201ENST00000398764 426 ntBASIC6.07□□□□□ -1.44
CDH1P12830 PSMA6P1-201ENST00000400275 741 ntBASIC6.07□□□□□ -1.44
CDH1P12830 RPL23AP17-201ENST00000401064 499 ntBASIC6.07□□□□□ -1.44
CDH1P12830 AC021876.1-201ENST00000425959 359 ntBASIC6.07□□□□□ -1.44
CDH1P12830 NFYAP1-201ENST00000431953 972 ntBASIC6.07□□□□□ -1.44
CDH1P12830 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH1P12830 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH1P12830 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH1P12830 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms