Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC013488.1-201ENST00000526618 1838 ntBASIC4.88□□□□□ -1.63
CD28P10747 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.88□□□□□ -1.63
CD28P10747 TNPO1P2-201ENST00000426249 2665 ntBASIC4.88□□□□□ -1.63
CD28P10747 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC4.87□□□□□ -1.63
CD28P10747 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.87□□□□□ -1.63
CD28P10747 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CD28P10747 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.87□□□□□ -1.63
CD28P10747 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 RNU1-134P-201ENST00000362935 165 ntBASIC4.87□□□□□ -1.63
CD28P10747 AL713922.1-201ENST00000416477 747 ntBASIC4.87□□□□□ -1.63
CD28P10747 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 AC130360.1-201ENST00000425489 1117 ntBASIC4.87□□□□□ -1.63
CD28P10747 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 AL451136.1-201ENST00000435399 325 ntBASIC4.87□□□□□ -1.63
CD28P10747 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.87□□□□□ -1.63
CD28P10747 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 SETP20-201ENST00000457046 852 ntBASIC4.87□□□□□ -1.63
CD28P10747 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 AC010343.2-201ENST00000510162 224 ntBASIC4.87□□□□□ -1.63
CD28P10747 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 OR5H7P-201ENST00000514084 930 ntBASIC4.87□□□□□ -1.63
CD28P10747 PRMT5P1-201ENST00000514351 598 ntBASIC4.87□□□□□ -1.63
CD28P10747 Y_RNA.710-201ENST00000516975 110 ntBASIC4.87□□□□□ -1.63
CD28P10747 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 AC130365.2-201ENST00000525882 1201 ntBASIC4.87□□□□□ -1.63
CD28P10747 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 AC010998.3-201ENST00000613871 631 ntBASIC4.87□□□□□ -1.63
CD28P10747 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 FO681491.1-202ENST00000623392 737 ntBASIC4.87□□□□□ -1.63
CD28P10747 AC016542.2-201ENST00000624201 619 ntBASIC4.87□□□□□ -1.63
CD28P10747 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.87□□□□□ -1.63
CD28P10747 AC011455.2-201ENST00000599320 3336 ntBASIC4.87□□□□□ -1.63
CD28P10747 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.87□□□□□ -1.63
CD28P10747 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD28P10747 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CD28P10747 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 AC005618.1-201ENST00000606901 3148 ntBASIC4.86□□□□□ -1.63
CD28P10747 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD28P10747 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 AC005332.9-201ENST00000620266 2921 ntBASIC4.86□□□□□ -1.63
CD28P10747 AC023490.2-201ENST00000359859 470 ntBASIC4.86□□□□□ -1.63
CD28P10747 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD28P10747 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 SUGT1P2-201ENST00000379452 992 ntBASIC4.86□□□□□ -1.63
CD28P10747 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 AL132875.1-201ENST00000403623 949 ntBASIC4.86□□□□□ -1.63
CD28P10747 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.86□□□□□ -1.63
CD28P10747 OR3D1P-201ENST00000438288 955 ntBASIC4.86□□□□□ -1.63
CD28P10747 PPIAP10-201ENST00000438675 458 ntBASIC4.86□□□□□ -1.63
CD28P10747 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.86□□□□□ -1.63
CD28P10747 AC002553.3-201ENST00000453002 341 ntBASIC4.86□□□□□ -1.63
CD28P10747 AC115223.1-201ENST00000466377 870 ntBASIC4.86□□□□□ -1.63
CD28P10747 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.86□□□□□ -1.63
CD28P10747 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.86□□□□□ -1.63
CD28P10747 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.86□□□□□ -1.63
CD28P10747 IGKV3D-34-201ENST00000522638 302 ntBASIC4.86□□□□□ -1.63
CD28P10747 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.86□□□□□ -1.63
CD28P10747 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.86□□□□□ -1.63
CD28P10747 COG2-209ENST00000534989 2963 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms