Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC4P09017 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC4P09017 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC4P09017 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HOXC4P09017 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC4P09017 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 KCTD9P1-201ENST00000430462 1167 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 RPL23AP60-201ENST00000450011 454 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC4P09017 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC4P09017 AC060775.1-201ENST00000518241 520 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AC092865.1-201ENST00000544395 1023 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.05□□□□□ -1.44
HOXC4P09017 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC4P09017 AP005119.1-201ENST00000580956 292 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AC005244.1-201ENST00000582566 339 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 AC067852.5-201ENST00000589299 310 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 AL645933.2-201ENST00000606743 1207 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AL096712.1-201ENST00000614561 159 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC4P09017 AL359742.1-201ENST00000622497 540 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 AC116667.2-201ENST00000641075 823 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC4P09017 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC4P09017 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC4P09017 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
HOXC4P09017 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC4P09017 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC4P09017 HDAC1P2-201ENST00000453661 1398 ntBASIC6.05□□□□□ -1.44
HOXC4P09017 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC4P09017 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 AC011815.2-201ENST00000618230 2021 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC4P09017 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 SAMMSON-210ENST00000641260 1308 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 AC023490.2-201ENST00000359859 470 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 SUGT1P2-201ENST00000379452 992 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC4P09017 AL096829.1-201ENST00000413677 457 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 VN1R3-201ENST00000418822 919 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 RPS15AP30-201ENST00000420976 390 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 VN1R110P-201ENST00000438988 971 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC4P09017 AL355355.1-201ENST00000442900 793 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC4P09017 RPS27AP3-201ENST00000453803 454 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 SCARNA18.1-201ENST00000516330 83 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 RNA5SP340-201ENST00000517132 107 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC4P09017 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC4P09017 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC4P09017 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC4P09017 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC4P09017 AL021368.3-201ENST00000607119 578 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC4P09017 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 FO681491.1-202ENST00000623392 737 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 AL357562.1-201ENST00000624911 609 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 AC003992.1-201ENST00000635364 557 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HOXC4P09017 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC4P09017 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 MAPK10-261ENST00000641050 3109 ntBASIC6.04□□□□□ -1.44
HOXC4P09017 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
HOXC4P09017 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC4P09017 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC4P09017 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC4P09017 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC4P09017 AC096921.2-201ENST00000561507 1916 ntBASIC6.03□□□□□ -1.44
HOXC4P09017 AP001541.1-201ENST00000623322 1904 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms