Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 RN7SL502P-201ENST00000481857 290 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 OR9A1P-202ENST00000484361 945 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC015524.1-201ENST00000491585 472 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 CCDC58P1-201ENST00000578567 430 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 LSM1P2-201ENST00000604911 322 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 HDAC1P2-201ENST00000453661 1398 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AC096921.2-201ENST00000561507 1916 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 SNORD94-201ENST00000386037 137 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AL121835.1-201ENST00000404250 354 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AL354707.3-201ENST00000427308 331 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AL355032.1-201ENST00000472981 438 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AC027229.1-201ENST00000583887 253 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AL589863.1-201ENST00000595383 631 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AC068726.1-201ENST00000610993 341 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 AC083837.1-201ENST00000565297 2994 ntBASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.45□□□□□ -1.54
RHBDD3Q9Y3P4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 AC007342.5-201ENST00000571340 2142 ntBASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 GTF3AP6-201ENST00000432585 986 ntBASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 AL022324.2-201ENST00000434827 780 ntBASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 GTF2IP14-201ENST00000441415 586 ntBASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 AL031681.1-201ENST00000443304 400 ntBASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 VPS25P1-201ENST00000455691 508 ntBASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDD3Q9Y3P4 RPS4XP17-201ENST00000479057 754 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms