Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PIP5K1P2-201ENST00000437005 1120 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AL356121.1-201ENST00000442911 156 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 RPL24P8-201ENST00000446071 474 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 SUMO2P2-201ENST00000456482 255 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 RN7SL233P-201ENST00000469988 277 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC026782.1-201ENST00000512952 449 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 SNORA70.17-201ENST00000516449 133 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 RBMS2P1-201ENST00000525031 1226 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 OR6C7P-201ENST00000547875 934 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC073544.2-201ENST00000601155 540 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 LLPHP1-201ENST00000603571 367 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AL163642.2-201ENST00000604722 1019 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 uc_338.37-201ENST00000620113 186 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AL451054.1-201ENST00000621770 772 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC008432.1-201ENST00000615912 1320 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AC079178.2-201ENST00000439323 1624 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 PDZK1P1-202ENST00000425209 1350 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AL008638.3-201ENST00000623027 5182 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 AL158152.1-201ENST00000602652 1435 ntBASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC9.48□□□□□ -0.89
PDZRN3Q9UPQ7 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 OR51A10P-201ENST00000307165 937 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AL451061.1-201ENST00000407887 862 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 U3.31-201ENST00000408113 216 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 SNORA2C-201ENST00000408564 137 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 FTOP1-201ENST00000419363 861 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 Z97055.1-201ENST00000419730 712 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 CENPIP1-201ENST00000425713 902 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC244033.1-201ENST00000426826 870 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 USP9YP9-201ENST00000429406 715 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC244035.1-201ENST00000430042 390 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AL022324.2-201ENST00000434827 780 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 USP9YP35-201ENST00000435696 412 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 RPL7P33-201ENST00000444159 742 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 TFP1-201ENST00000460564 572 ntTSL 4 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 RN7SL153P-201ENST00000486501 292 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 TFP1-203ENST00000490470 561 ntTSL 4 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC008040.4-201ENST00000494834 768 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 RNU6-759P-201ENST00000516740 103 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC012182.1-201ENST00000570133 895 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC013553.2-201ENST00000604244 589 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC008277.2-201ENST00000605196 797 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC079248.2-201ENST00000623779 326 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC073488.2-201ENST00000631903 751 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC135068.11-201ENST00000636378 921 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC024614.3-201ENST00000637860 256 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 MIR1322-201ENST00000638013 71 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 AC006058.1-201ENST00000568686 5067 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 KYNUP3-201ENST00000574386 1341 ntBASIC9.47□□□□□ -0.89
PDZRN3Q9UPQ7 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 242.6 ms