Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 RN7SKP15-201ENST00000364742 309 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC094019.1-201ENST00000434678 472 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC112184.1-201ENST00000505179 312 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 SNX18P24-201ENST00000505249 671 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 KHDC1P1-201ENST00000511053 508 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 IGHV4-55-201ENST00000520889 368 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC011497.2-201ENST00000600255 639 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC015849.6-201ENST00000605454 474 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AL136097.3-201ENST00000611097 505 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AL157762.1-201ENST00000619612 415 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 MRPL57P1-201ENST00000621486 265 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 AC073488.6-201ENST00000632293 754 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 ICE2P1-201ENST00000512800 1849 ntBASIC6.29□□□□□ -1.4
SPASTQ9UBP0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPASTQ9UBP0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AL157702.1-201ENST00000398764 426 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AL050305.1-201ENST00000399993 1230 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC110602.1-201ENST00000437414 318 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC016724.1-201ENST00000453215 421 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 NDUFA5P5-201ENST00000468361 342 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RPL23AP64-201ENST00000469465 435 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RPL12P31-201ENST00000478433 450 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RPL12P30-201ENST00000488389 499 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RN7SL104P-201ENST00000498686 293 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RNA5SP206-201ENST00000516703 121 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC009879.1-201ENST00000520029 839 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC091167.5-201ENST00000605689 894 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AP003072.5-201ENST00000623872 773 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AL355480.1-201ENST00000629041 99 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 OR7E91P-202ENST00000642062 1198 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC062022.1-201ENST00000451026 1684 ntBASIC6.28□□□□□ -1.4
SPASTQ9UBP0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPASTQ9UBP0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SPASTQ9UBP0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SPASTQ9UBP0 RNA5SP188-201ENST00000362916 129 ntBASIC6.27□□□□□ -1.41
SPASTQ9UBP0 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms