Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CST12P-201ENST00000457644 362 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 SNX18P26-201ENST00000458433 740 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC023194.2-201ENST00000465398 406 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC025458.1-201ENST00000506046 166 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC021269.1-201ENST00000526860 705 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC092865.1-201ENST00000544395 1023 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC233702.7-202ENST00000582941 211 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC006924.1-201ENST00000610750 559 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AP002371.2-201ENST00000624450 503 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AL589993.1-201ENST00000407450 2524 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC061975.7-201ENST00000592016 2692 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 OR51C1P-202ENST00000641159 1444 ntBASIC7.09□□□□□ -1.28
COL20A1Q9P218 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.09□□□□□ -1.28
COL20A1Q9P218 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.09□□□□□ -1.28
COL20A1Q9P218 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC022325.1-201ENST00000502748 2199 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 RNU6-883P-201ENST00000384597 107 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 MIR7-1-201ENST00000384871 110 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AL096711.1-201ENST00000404780 554 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC013268.2-201ENST00000420753 337 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC130360.1-201ENST00000425489 1117 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 SDR42E1P3-201ENST00000438345 502 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 ATP5LP2-201ENST00000440646 311 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 VN1R38P-201ENST00000450265 887 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC016724.1-201ENST00000453215 421 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 VPS25P1-201ENST00000455691 508 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC094085.1-201ENST00000468914 584 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC006499.4-201ENST00000510947 694 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC130365.2-201ENST00000525882 1201 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC090079.2-201ENST00000575289 768 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC020978.7-201ENST00000575953 1187 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC020765.1-201ENST00000604296 328 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC092681.3-201ENST00000609463 678 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 OR7A1P-202ENST00000641542 1158 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AL353763.1-201ENST00000624467 1628 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 AC006213.6-201ENST00000623722 4179 ntBASIC7.08□□□□□ -1.28
COL20A1Q9P218 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL20A1Q9P218 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.08□□□□□ -1.28
COL20A1Q9P218 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.07□□□□□ -1.28
COL20A1Q9P218 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL20A1Q9P218 AC011416.1-201ENST00000514947 1732 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms