Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.52□□□□□ -1.2
RPAP1Q9BWH6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.52□□□□□ -1.2
RPAP1Q9BWH6 AC084782.1-201ENST00000564401 2465 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 CASC19-238ENST00000641523 1558 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AC127024.8-201ENST00000623719 2094 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 OR7E25P-201ENST00000344844 931 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 OR11H13P-201ENST00000359695 979 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 SNORA17A-201ENST00000391185 133 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 OR3D1P-201ENST00000438288 955 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AL391987.1-201ENST00000441025 200 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AC073109.1-201ENST00000445066 978 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 HIGD1AP16-201ENST00000450986 258 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AC002553.3-201ENST00000453002 341 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 RN7SL214P-201ENST00000487317 265 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 RN7SL101P-201ENST00000496350 279 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AL021368.3-201ENST00000607119 578 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 SNORA17.5-201ENST00000630429 132 ntBASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
RPAP1Q9BWH6 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 SNORA70.9-201ENST00000384370 135 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AL031985.1-201ENST00000392713 418 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AC016769.2-201ENST00000414815 475 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 RPL23AP19-201ENST00000436229 369 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AC023141.3-201ENST00000436698 278 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 RNA5SP340-201ENST00000517132 107 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AP001858.2-201ENST00000536213 601 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AC007956.1-201ENST00000555623 542 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AL137246.2-201ENST00000613439 662 ntBASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RPAP1Q9BWH6 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 RN7SKP144-201ENST00000411108 279 ntBASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 CHEK2P5-201ENST00000423877 246 ntBASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 CFL1P4-201ENST00000451536 498 ntBASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 AC115223.1-201ENST00000466377 870 ntBASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms