Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 PAICSP2-201ENST00000429118 1150 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 HMGN1P32-201ENST00000441744 256 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AL031681.1-201ENST00000443304 400 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC135999.1-201ENST00000478962 479 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC044810.1-201ENST00000480271 711 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC021220.1-201ENST00000507445 630 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC025768.1-201ENST00000510057 267 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC087752.2-201ENST00000521219 281 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC090115.2-201ENST00000548060 883 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 OR4C49P-201ENST00000563891 900 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AL390877.1-201ENST00000605704 214 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC068213.1-201ENST00000625124 226 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 RN7SKP47-201ENST00000365347 328 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 RNA5SP474-201ENST00000391234 90 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL050305.1-201ENST00000399993 1230 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 RN7SKP146-201ENST00000410242 334 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL512504.1-201ENST00000415494 778 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 RPL7AP14-201ENST00000424041 802 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AJ239321.1-201ENST00000424255 564 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 E2F6P3-201ENST00000441743 743 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 OR52Y1P-201ENST00000452418 828 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC117395.1-201ENST00000487390 403 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 RN7SL37P-201ENST00000490461 307 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 SNORA58-201ENST00000505219 137 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 RN7SKP157-201ENST00000516174 282 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 RN7SKP196-201ENST00000516267 345 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 PPIAP14-201ENST00000577627 496 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 RN7SL270P-201ENST00000579643 281 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 GTF2IP4-201ENST00000453092 2054 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS50Q96JG6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS50Q96JG6 CASC19-255ENST00000641733 1385 ntBASIC6.41□□□□□ -1.38
VPS50Q96JG6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms