Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 SNX18P26-201ENST00000458433 740 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 RN7SL393P-201ENST00000463588 296 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 RPS26P24-201ENST00000497656 331 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 SETP21-201ENST00000514799 892 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC073916.1-201ENST00000545095 130 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC027667.1-201ENST00000545814 304 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 MTND4LP25-201ENST00000570218 163 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 MIR4301-201ENST00000577203 66 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC008957.3-201ENST00000624112 2242 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 RNA5SP478-201ENST00000364657 115 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 RNA5SP85-201ENST00000365378 119 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 RPL7P58-201ENST00000402913 758 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 U3.43-201ENST00000410734 213 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 MTND4LP21-201ENST00000415303 295 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 GAPDHP19-201ENST00000431768 1005 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AL355355.1-201ENST00000442900 793 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AC138409.2-202ENST00000507274 458 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AC104997.1-201ENST00000519761 717 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 COX6B1P4-201ENST00000519826 484 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AL136520.1-202ENST00000555494 763 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 MIR6885-201ENST00000612241 66 ntBASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CDK5RAP3Q96JB5 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 RNA5SP485-201ENST00000365053 119 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 OR6R1P-201ENST00000431838 940 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 MED28P4-201ENST00000433137 572 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 RPL31P53-201ENST00000457065 348 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 EIF4E2P2-201ENST00000492033 736 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC018645.1-201ENST00000505003 109 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AP005639.1-201ENST00000526939 192 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 VN1R81P-201ENST00000602085 372 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AL583832.1-201ENST00000603227 784 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC105148.1-201ENST00000604961 409 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC068726.1-201ENST00000610993 341 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AL356752.1-201ENST00000615844 593 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms