Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.5□□□□□ -1.37
LMO3Q8TAP4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LMO3Q8TAP4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LMO3Q8TAP4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 RNU1-134P-201ENST00000362935 165 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 RBBP4P5-201ENST00000398583 1266 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AL096800.1-201ENST00000405326 893 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AL359885.1-201ENST00000415786 903 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 CUBNP2-201ENST00000443534 1139 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 RPL5P7-201ENST00000444235 813 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC124945.1-201ENST00000485133 188 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC006518.1-201ENST00000541449 943 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 PRELID3BP3-201ENST00000584963 545 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC022960.2-201ENST00000616300 666 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC016542.2-201ENST00000624201 619 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 AC004014.2-201ENST00000623718 5122 ntBASIC6.49□□□□□ -1.37
LMO3Q8TAP4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LMO3Q8TAP4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AL354854.1-201ENST00000455940 1363 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AL132875.1-201ENST00000403623 949 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 GCNT1P4-201ENST00000404096 329 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 MYL6P5-201ENST00000412707 459 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 RPL7AP14-201ENST00000424041 802 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AL139158.1-201ENST00000424719 340 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC092651.1-201ENST00000426110 312 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AL354893.1-201ENST00000433735 348 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AL353662.1-201ENST00000439099 327 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AL390879.1-201ENST00000439143 386 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 TRIM60P16-201ENST00000444048 694 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 HMGB1P7-201ENST00000450921 612 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 ACA64.4-201ENST00000459070 127 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 RN7SL254P-201ENST00000460609 284 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC108103.1-201ENST00000511286 446 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 MAST4-IT1-201ENST00000514241 658 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 RN7SKP35-201ENST00000517210 151 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC005224.3-201ENST00000584683 2140 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC073333.2-201ENST00000603589 769 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 uc_338.26-201ENST00000612659 160 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 AC130304.1-201ENST00000622942 2385 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 PSG10P-201ENST00000501199 1500 ntBASIC6.48□□□□□ -1.37
LMO3Q8TAP4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LMO3Q8TAP4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms