Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC005225.5-201ENST00000623547 2225 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 RNU1-49P-201ENST00000363468 159 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AL133260.1-201ENST00000405720 405 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC094019.1-201ENST00000434678 472 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 GAPDHP23-201ENST00000444823 993 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 NDUFA5P8-201ENST00000449019 346 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC112187.1-201ENST00000455837 479 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 TPRKBP1-201ENST00000456243 481 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 EIF2S2P5-201ENST00000457635 968 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC008945.1-201ENST00000505144 499 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 MRPL57P6-201ENST00000506570 309 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 NACAP5-201ENST00000509863 636 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 KHDC1P1-201ENST00000511053 508 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC138517.1-201ENST00000515724 568 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC113191.1-201ENST00000517759 403 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 OR6M2P-201ENST00000529831 871 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC090651.1-201ENST00000567865 634 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 DYNLL1P1-201ENST00000595442 269 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC027334.1-201ENST00000603257 310 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC011458.1-201ENST00000604034 617 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AL161912.3-201ENST00000605404 628 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC016542.1-201ENST00000608259 493 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC022106.1-201ENST00000612834 766 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AL162377.2-201ENST00000624532 337 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC005725.1-201ENST00000577346 2607 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 AC034229.2-201ENST00000566945 2508 ntBASIC6.16□□□□□ -1.42
ZNF549Q6P9A3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC079753.1-201ENST00000623243 3868 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 RNA5SP346-201ENST00000363541 121 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 SNORA70.9-201ENST00000384370 135 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 RNU6-1176P-201ENST00000390955 107 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 YWHAZP4-201ENST00000392459 708 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 RN7SKP151-201ENST00000410230 316 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 RN7SKP38-201ENST00000410782 309 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 NPM1P36-201ENST00000415681 835 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 HSFY7P-201ENST00000432672 318 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 HSFY8P-201ENST00000437934 318 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms