Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 ZNF90P1-201ENST00000480493 1951 ntBASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.78□□□□□ -1.16
CCDC144BQ3MJ40 AC011504.1-201ENST00000623331 4103 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 TMEM161BP1-201ENST00000457388 1457 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AL391261.1-201ENST00000555712 1479 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 MIR16-2-201ENST00000362117 81 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 RNA5SP172-201ENST00000365061 118 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 SNRPFP2-201ENST00000440710 251 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 PSMA6P2-201ENST00000457574 686 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC099340.1-201ENST00000475247 599 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 OR7E22P-201ENST00000478335 1035 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC007068.2-201ENST00000543168 395 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 NXPE2P1-201ENST00000543705 726 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC245884.10-201ENST00000597355 337 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC007255.2-201ENST00000604053 631 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC067838.1-201ENST00000606064 577 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AL591926.1-201ENST00000620542 217 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC089999.3-201ENST00000622440 577 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AL683826.1-201ENST00000624104 627 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC061999.1-201ENST00000624454 177 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 NEK2P4-201ENST00000425793 1329 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AL512310.3-201ENST00000547023 1335 ntBASIC7.77□□□□□ -1.17
CCDC144BQ3MJ40 AC245100.2-201ENST00000454544 1679 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC007382.1-201ENST00000624376 2618 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC005618.1-201ENST00000606901 3148 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 OR7A2P-201ENST00000304105 930 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RNFT1P3-201ENST00000340898 1052 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RNA5SP105-201ENST00000391123 113 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 NIFKP3-201ENST00000417799 865 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RPS26P13-201ENST00000419030 330 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 MTND4LP13-201ENST00000425022 298 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 GAPDHP20-201ENST00000444107 1007 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 CCNJP1-201ENST00000450600 1149 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC118758.1-202ENST00000454719 225 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RPL32P14-201ENST00000463196 378 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC063943.2-201ENST00000495697 534 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC106822.1-201ENST00000502647 526 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms