Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
GTF2BQ00403 SNORA77.2-201ENST00000408571 112 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 RPL35AP3-201ENST00000414680 288 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GTF2BQ00403 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AL731534.1-201ENST00000434711 269 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 PPIAP27-201ENST00000453800 265 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.64□□□□□ -1.35
GTF2BQ00403 LSM3P4-201ENST00000502948 309 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 LDHAP1-201ENST00000509421 992 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.64□□□□□ -1.35
GTF2BQ00403 BCAS2P1-201ENST00000528022 632 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
GTF2BQ00403 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.64□□□□□ -1.35
GTF2BQ00403 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.64□□□□□ -1.35
GTF2BQ00403 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.64□□□□□ -1.35
GTF2BQ00403 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.64□□□□□ -1.35
GTF2BQ00403 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GTF2BQ00403 AC093225.1-201ENST00000506867 1408 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
GTF2BQ00403 PSG10P-201ENST00000501199 1500 ntBASIC6.64□□□□□ -1.35
GTF2BQ00403 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.64□□□□□ -1.35
GTF2BQ00403 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.64□□□□□ -1.35
GTF2BQ00403 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.64□□□□□ -1.35
GTF2BQ00403 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GTF2BQ00403 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
GTF2BQ00403 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.64□□□□□ -1.35
GTF2BQ00403 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GTF2BQ00403 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.64□□□□□ -1.35
GTF2BQ00403 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
GTF2BQ00403 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.63□□□□□ -1.35
GTF2BQ00403 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.63□□□□□ -1.35
GTF2BQ00403 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
GTF2BQ00403 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
GTF2BQ00403 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.63□□□□□ -1.35
GTF2BQ00403 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
GTF2BQ00403 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 IFIT1P1-201ENST00000400497 1449 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 AL121835.1-201ENST00000404250 354 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.63□□□□□ -1.35
GTF2BQ00403 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
GTF2BQ00403 AMYP1-201ENST00000440059 1023 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 AL445466.1-201ENST00000448432 357 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 AL162739.1-201ENST00000450606 307 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 GNL2P1-201ENST00000451274 2190 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 AC023194.2-201ENST00000465398 406 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 AL355032.1-201ENST00000472981 438 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 CCDC11P1-201ENST00000503137 1162 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 AC110056.1-201ENST00000525759 911 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.63□□□□□ -1.35
GTF2BQ00403 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.63□□□□□ -1.35
GTF2BQ00403 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.63□□□□□ -1.35
GTF2BQ00403 AC008507.3-201ENST00000585753 472 ntBASIC6.63□□□□□ -1.35
GTF2BQ00403 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
GTF2BQ00403 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.63□□□□□ -1.35
GTF2BQ00403 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.62□□□□□ -1.35
GTF2BQ00403 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
GTF2BQ00403 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.62□□□□□ -1.35
GTF2BQ00403 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
GTF2BQ00403 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
GTF2BQ00403 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.62□□□□□ -1.35
GTF2BQ00403 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
GTF2BQ00403 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.62□□□□□ -1.35
GTF2BQ00403 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
GTF2BQ00403 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GTF2BQ00403 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
GTF2BQ00403 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
GTF2BQ00403 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
GTF2BQ00403 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GTF2BQ00403 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GTF2BQ00403 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
GTF2BQ00403 RBPJP7-201ENST00000442803 1447 ntBASIC6.62□□□□□ -1.35
GTF2BQ00403 RBPJP5-201ENST00000449433 1447 ntBASIC6.62□□□□□ -1.35
GTF2BQ00403 AC114876.1-201ENST00000490962 1366 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms