Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 AL359091.1-201ENST00000449048 1734 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3AP84243 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3AP84243 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
H3F3AP84243 SNORA43.1-201ENST00000364863 140 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 YWHAZP6-201ENST00000399764 738 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 RNA5SP251-201ENST00000410614 137 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AC116036.1-201ENST00000412199 367 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 HMGA1P8-201ENST00000414130 321 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.55□□□□□ -1.52
H3F3AP84243 AC007562.1-201ENST00000421819 517 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 RPL34P27-201ENST00000428810 349 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.55□□□□□ -1.52
H3F3AP84243 AC010086.1-201ENST00000437359 1052 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 GAPDHP23-201ENST00000444823 993 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AC023274.2-201ENST00000445264 521 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3AP84243 AC005017.1-201ENST00000482002 490 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 RPL12P30-201ENST00000488389 499 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 EIF4E2P2-201ENST00000492033 736 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3AP84243 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3AP84243 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3AP84243 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.55□□□□□ -1.52
H3F3AP84243 AP005136.2-201ENST00000583253 1049 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 RPSAP75-201ENST00000605848 301 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 AC116667.2-201ENST00000641075 823 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 OR7A1P-202ENST00000641542 1158 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3AP84243 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3AP84243 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
H3F3AP84243 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3AP84243 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
H3F3AP84243 PPBPP2-201ENST00000513150 1362 ntBASIC5.55□□□□□ -1.52
H3F3AP84243 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
H3F3AP84243 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 CCNT2P1-201ENST00000423082 1315 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.54□□□□□ -1.52
H3F3AP84243 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H3F3AP84243 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 RN7SKP171-201ENST00000364417 303 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H3F3AP84243 RN7SKP144-201ENST00000411108 279 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 AC092865.3-201ENST00000425390 1026 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 RPSAP65-201ENST00000429660 595 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 AC108479.1-201ENST00000431142 427 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 TIMM8BP2-201ENST00000445940 251 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.54□□□□□ -1.52
H3F3AP84243 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.54□□□□□ -1.52
H3F3AP84243 SETP4-201ENST00000455717 868 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 AC113367.2-201ENST00000505749 160 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.54□□□□□ -1.52
H3F3AP84243 HMGN1P17-201ENST00000513734 295 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.54□□□□□ -1.52
H3F3AP84243 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.54□□□□□ -1.52
H3F3AP84243 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.54□□□□□ -1.52
H3F3AP84243 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.54□□□□□ -1.52
H3F3AP84243 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.54□□□□□ -1.52
H3F3AP84243 AC005828.7-201ENST00000607331 556 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 AL137246.2-201ENST00000613439 662 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 AC003992.1-201ENST00000635364 557 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3AP84243 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 AC024651.2-201ENST00000562480 2098 ntBASIC5.54□□□□□ -1.52
H3F3AP84243 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3AP84243 SHQ1P1-201ENST00000437111 1544 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AC090181.3-201ENST00000624777 1514 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3AP84243 LCN1P2-201ENST00000372030 223 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 RBBP4P5-201ENST00000398583 1266 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.53□□□□□ -1.52
H3F3AP84243 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3AP84243 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3AP84243 CLNS1AP1-201ENST00000435954 682 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3AP84243 AC010240.2-201ENST00000445363 1205 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms