Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 AC024651.2-201ENST00000562480 2098 ntBASIC4.22□□□□□ -1.73
RPL39P62891 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPL39P62891 THAP12P9-201ENST00000503971 2360 ntBASIC4.21□□□□□ -1.73
RPL39P62891 AL049869.1-201ENST00000556933 1402 ntBASIC4.21□□□□□ -1.73
RPL39P62891 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RPL39P62891 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 SNORA7A-201ENST00000384765 139 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.21□□□□□ -1.74
RPL39P62891 PPIAP23-201ENST00000420099 497 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AL672212.1-201ENST00000422246 400 ntBASIC4.21□□□□□ -1.74
RPL39P62891 PTPN2P1-201ENST00000423212 1072 ntBASIC4.21□□□□□ -1.74
RPL39P62891 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.21□□□□□ -1.74
RPL39P62891 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AC138761.5-201ENST00000433967 325 ntBASIC4.21□□□□□ -1.74
RPL39P62891 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 AL512593.1-201ENST00000444758 779 ntBASIC4.21□□□□□ -1.74
RPL39P62891 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 RBMY2EP-202ENST00000456360 940 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AC108751.3-201ENST00000461814 1020 ntBASIC4.21□□□□□ -1.74
RPL39P62891 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
RPL39P62891 AC008868.1-201ENST00000509786 737 ntBASIC4.21□□□□□ -1.74
RPL39P62891 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
RPL39P62891 AC090958.1-201ENST00000511122 351 ntBASIC4.21□□□□□ -1.74
RPL39P62891 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.21□□□□□ -1.74
RPL39P62891 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.21□□□□□ -1.74
RPL39P62891 AC078899.1-201ENST00000521432 1185 ntBASIC4.21□□□□□ -1.74
RPL39P62891 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.21□□□□□ -1.74
RPL39P62891 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.21□□□□□ -1.74
RPL39P62891 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 AC023080.1-201ENST00000551663 931 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AC007346.2-201ENST00000564816 892 ntBASIC4.21□□□□□ -1.74
RPL39P62891 ZNF322P1-201ENST00000568013 1209 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AC090826.1-203ENST00000569235 490 ntBASIC4.21□□□□□ -1.74
RPL39P62891 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.21□□□□□ -1.74
RPL39P62891 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.21□□□□□ -1.74
RPL39P62891 MIR4258-201ENST00000580920 91 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 AL133481.2-203ENST00000607558 139 ntBASIC4.21□□□□□ -1.74
RPL39P62891 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AL121985.3-201ENST00000620690 523 ntBASIC4.21□□□□□ -1.74
RPL39P62891 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
RPL39P62891 AL355480.4-201ENST00000626823 69 ntBASIC4.21□□□□□ -1.74
RPL39P62891 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.21□□□□□ -1.74
RPL39P62891 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.21□□□□□ -1.74
RPL39P62891 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPL39P62891 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 AC130304.1-201ENST00000622942 2385 ntBASIC4.2□□□□□ -1.74
RPL39P62891 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RPL39P62891 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RPL39P62891 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 OR10R3P-201ENST00000361688 942 ntBASIC4.2□□□□□ -1.74
RPL39P62891 RNA5SP346-201ENST00000363541 121 ntBASIC4.2□□□□□ -1.74
RPL39P62891 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RPL39P62891 AC087752.1-201ENST00000391360 558 ntBASIC4.2□□□□□ -1.74
RPL39P62891 RN7SKP205-201ENST00000410999 307 ntBASIC4.2□□□□□ -1.74
RPL39P62891 MYL6P5-201ENST00000412707 459 ntBASIC4.2□□□□□ -1.74
RPL39P62891 DHFRP2-201ENST00000414224 547 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AL158827.1-201ENST00000416300 391 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AC009506.2-201ENST00000420635 840 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AC112492.2-201ENST00000432774 1030 ntBASIC4.2□□□□□ -1.74
RPL39P62891 MTND2P40-201ENST00000436718 841 ntBASIC4.2□□□□□ -1.74
RPL39P62891 EMC3-AS1-205ENST00000438698 534 ntBASIC4.2□□□□□ -1.74
RPL39P62891 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.2□□□□□ -1.74
RPL39P62891 AL592114.2-201ENST00000440142 532 ntBASIC4.2□□□□□ -1.74
RPL39P62891 SOCS5P1-201ENST00000440415 949 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC4.2□□□□□ -1.74
RPL39P62891 AL845321.1-201ENST00000444603 348 ntBASIC4.2□□□□□ -1.74
RPL39P62891 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.2□□□□□ -1.74
RPL39P62891 FRG2FP-204ENST00000453982 852 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AL133351.3-201ENST00000454998 193 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms