Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 AL662874.1-201ENST00000426065 230 ntBASIC7.44□□□□□ -1.22
NUP98P52948 AL022331.1-201ENST00000429025 477 ntBASIC7.44□□□□□ -1.22
NUP98P52948 FRG2FP-204ENST00000453982 852 ntBASIC7.44□□□□□ -1.22
NUP98P52948 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.44□□□□□ -1.22
NUP98P52948 AC244502.2-201ENST00000543361 851 ntBASIC7.44□□□□□ -1.22
NUP98P52948 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.44□□□□□ -1.22
NUP98P52948 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.44□□□□□ -1.22
NUP98P52948 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 AL589674.2-201ENST00000604304 337 ntBASIC7.44□□□□□ -1.22
NUP98P52948 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 AC018659.2-201ENST00000624690 715 ntBASIC7.44□□□□□ -1.22
NUP98P52948 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
NUP98P52948 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.44□□□□□ -1.22
NUP98P52948 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
NUP98P52948 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.44□□□□□ -1.22
NUP98P52948 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.43□□□□□ -1.22
NUP98P52948 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NUP98P52948 RNA5SP333-201ENST00000363466 118 ntBASIC7.43□□□□□ -1.22
NUP98P52948 RNA5SP334-201ENST00000364825 118 ntBASIC7.43□□□□□ -1.22
NUP98P52948 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.43□□□□□ -1.22
NUP98P52948 OR2AT2P-201ENST00000413438 905 ntBASIC7.43□□□□□ -1.22
NUP98P52948 NME1P1-201ENST00000420914 382 ntBASIC7.43□□□□□ -1.22
NUP98P52948 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.43□□□□□ -1.22
NUP98P52948 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NUP98P52948 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.43□□□□□ -1.22
NUP98P52948 AC023245.1-201ENST00000468501 517 ntBASIC7.43□□□□□ -1.22
NUP98P52948 SIAH1P1-201ENST00000479411 923 ntBASIC7.43□□□□□ -1.22
NUP98P52948 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.43□□□□□ -1.22
NUP98P52948 AL021707.7-201ENST00000607991 416 ntBASIC7.43□□□□□ -1.22
NUP98P52948 MIR6719-201ENST00000622428 87 ntBASIC7.43□□□□□ -1.22
NUP98P52948 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.43□□□□□ -1.22
NUP98P52948 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NUP98P52948 AC131649.2-201ENST00000624925 4439 ntBASIC7.43□□□□□ -1.22
NUP98P52948 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 MAPK10-261ENST00000641050 3109 ntBASIC7.43□□□□□ -1.22
NUP98P52948 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NUP98P52948 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NUP98P52948 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NUP98P52948 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.43□□□□□ -1.22
NUP98P52948 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 MYL6P5-201ENST00000412707 459 ntBASIC7.43□□□□□ -1.22
NUP98P52948 GTF3AP1-201ENST00000416942 1004 ntBASIC7.43□□□□□ -1.22
NUP98P52948 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.43□□□□□ -1.22
NUP98P52948 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.43□□□□□ -1.22
NUP98P52948 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.43□□□□□ -1.22
NUP98P52948 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.43□□□□□ -1.22
NUP98P52948 RN7SL72P-201ENST00000460697 269 ntBASIC7.43□□□□□ -1.22
NUP98P52948 AC008945.1-201ENST00000505144 499 ntBASIC7.43□□□□□ -1.22
NUP98P52948 AC006499.3-201ENST00000506077 748 ntBASIC7.43□□□□□ -1.22
NUP98P52948 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.43□□□□□ -1.22
NUP98P52948 SNORA43.3-201ENST00000517240 103 ntBASIC7.43□□□□□ -1.22
NUP98P52948 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.43□□□□□ -1.22
NUP98P52948 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 AC022404.1-201ENST00000555320 273 ntBASIC7.43□□□□□ -1.22
NUP98P52948 AC051619.2-201ENST00000559063 397 ntBASIC7.43□□□□□ -1.22
NUP98P52948 OR7A1P-201ENST00000601206 970 ntBASIC7.43□□□□□ -1.22
NUP98P52948 AC027334.1-201ENST00000603257 310 ntBASIC7.43□□□□□ -1.22
NUP98P52948 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.43□□□□□ -1.22
NUP98P52948 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.43□□□□□ -1.22
NUP98P52948 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUP98P52948 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 AC092725.2-201ENST00000567658 1389 ntBASIC7.42□□□□□ -1.22
NUP98P52948 LINC01616-201ENST00000561816 2280 ntBASIC7.42□□□□□ -1.22
NUP98P52948 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.42□□□□□ -1.22
NUP98P52948 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.42□□□□□ -1.22
NUP98P52948 SALL4P7-201ENST00000555779 3120 ntBASIC7.42□□□□□ -1.22
NUP98P52948 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NUP98P52948 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
NUP98P52948 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 MARK2P12-201ENST00000420129 585 ntBASIC7.42□□□□□ -1.22
NUP98P52948 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms