Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 RNA5SP346-201ENST00000363541 121 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL157702.1-201ENST00000398764 426 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 RN7SKP144-201ENST00000411108 279 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 TMA16P2-201ENST00000413187 601 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC245884.2-201ENST00000426257 404 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 ARMC4P1-201ENST00000438905 707 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL645936.1-201ENST00000441979 518 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC073476.1-201ENST00000452854 407 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AL133351.3-201ENST00000454998 193 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 RARRES2P3-201ENST00000457739 473 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC128716.1-201ENST00000475129 166 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 H3F3AP5-201ENST00000475267 429 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 RN7SL104P-201ENST00000498686 293 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC092865.1-201ENST00000544395 1023 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC090115.2-201ENST00000548060 883 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC023310.2-201ENST00000553844 547 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 MT1CP-201ENST00000567054 174 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 NPIPB1P-202ENST00000588786 828 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC015819.1-201ENST00000613588 663 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC012676.3-201ENST00000614983 479 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC021422.1-201ENST00000621212 473 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 MIR6813-201ENST00000621638 56 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC010325.3-201ENST00000641084 394 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC005225.5-201ENST00000623547 2225 ntBASIC5.53□□□□□ -1.52
CSNK1A1P48729 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSNK1A1P48729 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
CSNK1A1P48729 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC096921.2-201ENST00000561507 1916 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AL353763.1-201ENST00000624467 1628 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 RN7SKP77-201ENST00000363261 353 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 RNU1-49P-201ENST00000363468 159 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 SNORA43.1-201ENST00000364863 140 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AL360271.1-201ENST00000395679 510 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CSNK1A1P48729 OR2W4P-201ENST00000406496 926 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 RPL7AP14-201ENST00000424041 802 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 RPS7P14-201ENST00000426405 583 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.52□□□□□ -1.53
CSNK1A1P48729 AC094019.1-201ENST00000434678 472 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 PPIAP10-201ENST00000438675 458 ntBASIC5.52□□□□□ -1.53
CSNK1A1P48729 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms