Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.18□□□□□ -1.42
RPA3P35244 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.18□□□□□ -1.42
RPA3P35244 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.18□□□□□ -1.42
RPA3P35244 AC026898.1-201ENST00000586404 571 ntBASIC6.18□□□□□ -1.42
RPA3P35244 AC005332.4-201ENST00000592752 579 ntBASIC6.18□□□□□ -1.42
RPA3P35244 AC063977.7-201ENST00000594454 337 ntBASIC6.18□□□□□ -1.42
RPA3P35244 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.18□□□□□ -1.42
RPA3P35244 AC011891.2-201ENST00000604949 397 ntBASIC6.18□□□□□ -1.42
RPA3P35244 AC015819.1-201ENST00000613588 663 ntBASIC6.18□□□□□ -1.42
RPA3P35244 AP001153.1-201ENST00000641024 338 ntBASIC6.18□□□□□ -1.42
RPA3P35244 OR7A1P-202ENST00000641542 1158 ntBASIC6.18□□□□□ -1.42
RPA3P35244 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RPA3P35244 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
RPA3P35244 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 AC025470.1-201ENST00000510053 2032 ntBASIC6.18□□□□□ -1.42
RPA3P35244 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 AC138907.8-201ENST00000623981 2256 ntBASIC6.18□□□□□ -1.42
RPA3P35244 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RPA3P35244 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.17□□□□□ -1.42
RPA3P35244 AL359091.1-201ENST00000449048 1734 ntBASIC6.17□□□□□ -1.42
RPA3P35244 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.17□□□□□ -1.42
RPA3P35244 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 RNU11-201ENST00000387069 134 ntBASIC6.17□□□□□ -1.42
RPA3P35244 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 EMC3-AS1-205ENST00000438698 534 ntBASIC6.17□□□□□ -1.42
RPA3P35244 RPL5P10-201ENST00000445207 894 ntBASIC6.17□□□□□ -1.42
RPA3P35244 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.17□□□□□ -1.42
RPA3P35244 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.17□□□□□ -1.42
RPA3P35244 GM2AP2-201ENST00000491764 562 ntBASIC6.17□□□□□ -1.42
RPA3P35244 AC117500.1-201ENST00000497352 755 ntBASIC6.17□□□□□ -1.42
RPA3P35244 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.17□□□□□ -1.42
RPA3P35244 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.17□□□□□ -1.42
RPA3P35244 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RPA3P35244 AC244502.2-201ENST00000543361 851 ntBASIC6.17□□□□□ -1.42
RPA3P35244 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.17□□□□□ -1.42
RPA3P35244 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.17□□□□□ -1.42
RPA3P35244 AL360012.1-201ENST00000602813 131 ntBASIC6.17□□□□□ -1.42
RPA3P35244 SNORA74.4-201ENST00000607595 199 ntBASIC6.17□□□□□ -1.42
RPA3P35244 MIR6823-201ENST00000622118 61 ntBASIC6.17□□□□□ -1.42
RPA3P35244 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.17□□□□□ -1.42
RPA3P35244 MAPK10-350ENST00000641777 965 ntBASIC6.17□□□□□ -1.42
RPA3P35244 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RPA3P35244 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.17□□□□□ -1.42
RPA3P35244 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.17□□□□□ -1.42
RPA3P35244 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RPA3P35244 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.17□□□□□ -1.42
RPA3P35244 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.16□□□□□ -1.42
RPA3P35244 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RPA3P35244 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RPA3P35244 PSMA6P1-201ENST00000400275 741 ntBASIC6.16□□□□□ -1.42
RPA3P35244 RPL21P50-201ENST00000417698 477 ntBASIC6.16□□□□□ -1.42
RPA3P35244 AC002127.1-201ENST00000421305 225 ntBASIC6.16□□□□□ -1.42
RPA3P35244 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 LINC00328-2P-201ENST00000436585 219 ntBASIC6.16□□□□□ -1.42
RPA3P35244 GTF2IP14-201ENST00000441415 586 ntBASIC6.16□□□□□ -1.42
RPA3P35244 MORF4-201ENST00000447135 971 ntBASIC6.16□□□□□ -1.42
RPA3P35244 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 AC093719.1-201ENST00000480427 441 ntBASIC6.16□□□□□ -1.42
RPA3P35244 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.16□□□□□ -1.42
RPA3P35244 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.16□□□□□ -1.42
RPA3P35244 AC093816.1-201ENST00000515076 913 ntBASIC6.16□□□□□ -1.42
RPA3P35244 AC008055.1-201ENST00000547032 609 ntBASIC6.16□□□□□ -1.42
RPA3P35244 AL049779.3-201ENST00000557141 606 ntBASIC6.16□□□□□ -1.42
RPA3P35244 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.16□□□□□ -1.42
RPA3P35244 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.16□□□□□ -1.42
RPA3P35244 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.16□□□□□ -1.42
RPA3P35244 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.16□□□□□ -1.42
RPA3P35244 AC244100.4-201ENST00000617747 388 ntBASIC6.16□□□□□ -1.42
RPA3P35244 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 MIR6811-201ENST00000620409 58 ntBASIC6.16□□□□□ -1.42
RPA3P35244 AL122023.1-201ENST00000622847 530 ntBASIC6.16□□□□□ -1.42
RPA3P35244 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms