Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PDGFRAP16234 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 AC096921.2-201ENST00000561507 1916 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 AL353763.1-201ENST00000624467 1628 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
PDGFRAP16234 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDGFRAP16234 RN7SKP187-201ENST00000365536 330 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 LCN1P2-201ENST00000372030 223 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFRAP16234 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 AL133351.3-201ENST00000454998 193 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 RN7SL362P-201ENST00000494228 267 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFRAP16234 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 RPA2P3-201ENST00000533268 770 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
PDGFRAP16234 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFRAP16234 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFRAP16234 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.54□□□□□ -1.36
PDGFRAP16234 RPSAP75-201ENST00000605848 301 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFRAP16234 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDGFRAP16234 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFRAP16234 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFRAP16234 AL133243.2-201ENST00000610331 1621 ntBASIC6.54□□□□□ -1.36
PDGFRAP16234 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFRAP16234 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDGFRAP16234 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC140479.2-201ENST00000421567 3130 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 RNU1-65P-201ENST00000363919 148 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.53□□□□□ -1.36
PDGFRAP16234 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 YWHAZP6-201ENST00000399764 738 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 RNA5SP198-201ENST00000410376 127 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC007562.1-201ENST00000421819 517 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AL355994.1-201ENST00000424379 260 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC099782.1-201ENST00000425889 474 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC244033.1-201ENST00000426826 870 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.53□□□□□ -1.36
PDGFRAP16234 PPIAP10-201ENST00000438675 458 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC023274.2-201ENST00000445264 521 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AL022319.1-201ENST00000458183 1167 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 ZNF519P4-201ENST00000514008 125 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.53□□□□□ -1.36
PDGFRAP16234 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 NPIPB14P-203ENST00000532298 987 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 OR4A40P-201ENST00000533878 948 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC092865.1-201ENST00000544395 1023 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.53□□□□□ -1.36
PDGFRAP16234 AC004232.2-201ENST00000574245 821 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 DYNLL1P1-201ENST00000595442 269 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.53□□□□□ -1.36
PDGFRAP16234 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 MIR7109-201ENST00000613748 65 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 uc_338.31-201ENST00000615595 186 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 AC241377.1-201ENST00000619797 406 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 SHQ1P1-201ENST00000437111 1544 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.53□□□□□ -1.36
PDGFRAP16234 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
PDGFRAP16234 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms