Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 AC078880.4-201ENST00000617627 1749 ntBASIC4.89□□□□□ -1.63
CD28P10747 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.89□□□□□ -1.63
CD28P10747 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.89□□□□□ -1.63
CD28P10747 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CD28P10747 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 RN7SKP78-201ENST00000364711 318 ntBASIC4.89□□□□□ -1.63
CD28P10747 LYPLA1P3-201ENST00000402650 695 ntBASIC4.89□□□□□ -1.63
CD28P10747 RN7SKP121-201ENST00000410842 305 ntBASIC4.89□□□□□ -1.63
CD28P10747 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.89□□□□□ -1.63
CD28P10747 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.89□□□□□ -1.63
CD28P10747 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.89□□□□□ -1.63
CD28P10747 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 HLA-DPA3-207ENST00000454398 229 ntBASIC4.89□□□□□ -1.63
CD28P10747 OR2AF1P-201ENST00000454899 889 ntBASIC4.89□□□□□ -1.63
CD28P10747 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
CD28P10747 AC104109.1-201ENST00000498563 436 ntBASIC4.89□□□□□ -1.63
CD28P10747 NPM1P27-201ENST00000502784 830 ntBASIC4.89□□□□□ -1.63
CD28P10747 MTND6P8-201ENST00000503471 522 ntBASIC4.89□□□□□ -1.63
CD28P10747 AC025458.1-201ENST00000506046 166 ntBASIC4.89□□□□□ -1.63
CD28P10747 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.89□□□□□ -1.63
CD28P10747 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 RNA5SP116-201ENST00000516132 98 ntBASIC4.89□□□□□ -1.63
CD28P10747 IGLVIV-64-201ENST00000518581 301 ntBASIC4.89□□□□□ -1.63
CD28P10747 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD28P10747 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 RN7SL753P-201ENST00000581238 290 ntBASIC4.89□□□□□ -1.63
CD28P10747 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.89□□□□□ -1.63
CD28P10747 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.89□□□□□ -1.63
CD28P10747 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.89□□□□□ -1.63
CD28P10747 AP001823.1-201ENST00000604056 1003 ntBASIC4.89□□□□□ -1.63
CD28P10747 AC024884.1-201ENST00000620583 399 ntBASIC4.89□□□□□ -1.63
CD28P10747 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.89□□□□□ -1.63
CD28P10747 AC112243.1-201ENST00000623949 3851 ntBASIC4.89□□□□□ -1.63
CD28P10747 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CD28P10747 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CD28P10747 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CD28P10747 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.89□□□□□ -1.63
CD28P10747 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CD28P10747 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CD28P10747 AL391261.1-201ENST00000555712 1479 ntBASIC4.88□□□□□ -1.63
CD28P10747 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.88□□□□□ -1.63
CD28P10747 AC025809.2-201ENST00000625085 1802 ntBASIC4.88□□□□□ -1.63
CD28P10747 MTCO1P28-201ENST00000574177 1528 ntBASIC4.88□□□□□ -1.63
CD28P10747 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.88□□□□□ -1.63
CD28P10747 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.88□□□□□ -1.63
CD28P10747 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
CD28P10747 AP000641.1-201ENST00000531988 1639 ntBASIC4.88□□□□□ -1.63
CD28P10747 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 RNA5SP510-201ENST00000364697 99 ntBASIC4.88□□□□□ -1.63
CD28P10747 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.88□□□□□ -1.63
CD28P10747 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.88□□□□□ -1.63
CD28P10747 CYCSP52-201ENST00000422857 310 ntBASIC4.88□□□□□ -1.63
CD28P10747 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.88□□□□□ -1.63
CD28P10747 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.88□□□□□ -1.63
CD28P10747 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.88□□□□□ -1.63
CD28P10747 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 CT45A11P-201ENST00000448043 1134 ntBASIC4.88□□□□□ -1.63
CD28P10747 PPIAP20-201ENST00000449839 135 ntBASIC4.88□□□□□ -1.63
CD28P10747 AC084754.1-201ENST00000463466 464 ntBASIC4.88□□□□□ -1.63
CD28P10747 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.88□□□□□ -1.63
CD28P10747 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.88□□□□□ -1.63
CD28P10747 SNORA58-201ENST00000505219 137 ntBASIC4.88□□□□□ -1.63
CD28P10747 RNA5SP340-201ENST00000517132 107 ntBASIC4.88□□□□□ -1.63
CD28P10747 NANOGNBP2-201ENST00000544753 553 ntBASIC4.88□□□□□ -1.63
CD28P10747 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.88□□□□□ -1.63
CD28P10747 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.88□□□□□ -1.63
CD28P10747 MIR4301-201ENST00000577203 66 ntBASIC4.88□□□□□ -1.63
CD28P10747 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.88□□□□□ -1.63
CD28P10747 AC008521.2-201ENST00000591021 259 ntBASIC4.88□□□□□ -1.63
CD28P10747 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.88□□□□□ -1.63
CD28P10747 AC137695.1-201ENST00000604126 489 ntBASIC4.88□□□□□ -1.63
CD28P10747 AL008723.3-201ENST00000608926 449 ntBASIC4.88□□□□□ -1.63
CD28P10747 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.88□□□□□ -1.63
CD28P10747 MIR7159-201ENST00000620587 66 ntBASIC4.88□□□□□ -1.63
CD28P10747 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.88□□□□□ -1.63
CD28P10747 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD28P10747 AC010624.4-201ENST00000597606 1351 ntBASIC4.88□□□□□ -1.63
CD28P10747 AC009135.2-201ENST00000624136 1768 ntBASIC4.88□□□□□ -1.63
CD28P10747 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC4.88□□□□□ -1.63
CD28P10747 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms