| MT1A | P04731 | RNU1-65P-201 | ENST00000363919 | 148 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RNA5SP279-201 | ENST00000365513 | 117 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RN7SKP187-201 | ENST00000365536 | 330 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | ZNF669-202 | ENST00000366500 | 489 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | CRP-204 | ENST00000368112 | 787 nt | TSL 2 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | TCEAL8-202 | ENST00000372685 | 1222 nt | APPRIS P1 TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | TRAV1-2-201 | ENST00000390423 | 402 nt | APPRIS P1 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AFP-202 | ENST00000395792 | 2484 nt | APPRIS P1 TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | GCNT1P4-201 | ENST00000404096 | 329 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL121835.1-201 | ENST00000404250 | 354 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RNA5SP156-201 | ENST00000410250 | 110 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RNA5SP431-201 | ENST00000410312 | 120 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL138733.1-201 | ENST00000415477 | 853 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RAD23B-202 | ENST00000416373 | 3835 nt | TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL512353.1-202 | ENST00000416809 | 627 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL160163.1-201 | ENST00000417465 | 403 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | LINC01638-201 | ENST00000418271 | 552 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | C7orf69-201 | ENST00000418326 | 675 nt | TSL 4 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RPL35AP31-201 | ENST00000418340 | 337 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | LINC00310-202 | ENST00000419881 | 910 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | MS4A6A-202 | ENST00000420732 | 863 nt | TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RPS15AP30-201 | ENST00000420976 | 390 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL137071.1-201 | ENST00000422150 | 243 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC078960.1-201 | ENST00000422160 | 177 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | TAB2-AS1-201 | ENST00000424421 | 730 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL354707.3-201 | ENST00000427308 | 331 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | Z98257.1-202 | ENST00000431027 | 2493 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | LINC02522-201 | ENST00000431401 | 256 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL022337.1-201 | ENST00000434510 | 357 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | PNKDP1-201 | ENST00000435914 | 430 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC092162.2-201 | ENST00000438143 | 532 nt | TSL 4 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RPSAP40-201 | ENST00000442343 | 891 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | BCAP29-207 | ENST00000445771 | 1157 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RPL23AP60-201 | ENST00000450011 | 454 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | SUMO2P10-201 | ENST00000452006 | 288 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL136982.3-201 | ENST00000454709 | 688 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC008080.2-201 | ENST00000455149 | 577 nt | TSL 4 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RPL7L1P3-201 | ENST00000455249 | 689 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC009963.3-201 | ENST00000458090 | 486 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL022319.1-201 | ENST00000458183 | 1167 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RN7SL168P-201 | ENST00000463821 | 279 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC104339.1-201 | ENST00000465478 | 348 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | SYPL1-205 | ENST00000470347 | 1193 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL355032.1-201 | ENST00000472981 | 438 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC021006.1-201 | ENST00000489849 | 553 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | KDELR2-206 | ENST00000490996 | 655 nt | TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC090058.1-201 | ENST00000498788 | 435 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | OR7E99P-201 | ENST00000505750 | 922 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC116634.1-201 | ENST00000506926 | 447 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | APOBEC3AP1-201 | ENST00000511396 | 287 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC093535.1-203 | ENST00000512500 | 730 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC006296.1-201 | ENST00000514401 | 591 nt | TSL 2 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | CYP4F27P-201 | ENST00000514557 | 494 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | CR383658.1-201 | ENST00000514609 | 734 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RNA5SP473-201 | ENST00000516402 | 125 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC040970.1-202 | ENST00000517908 | 505 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | TPT1-AS1-207 | ENST00000520310 | 563 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC008429.4-201 | ENST00000521201 | 182 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | CASC21-201 | ENST00000521586 | 290 nt | TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC021269.1-201 | ENST00000526860 | 705 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC084855.1-201 | ENST00000528696 | 572 nt | TSL 2 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC024405.1-201 | ENST00000532521 | 1042 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC084121.1-201 | ENST00000533882 | 835 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | TCF12-205 | ENST00000537840 | 1598 nt | TSL 2 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC092865.1-201 | ENST00000544395 | 1023 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | C12orf4-209 | ENST00000545746 | 2168 nt | APPRIS P1 TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | BICD1-206 | ENST00000551086 | 423 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC090502.3-201 | ENST00000552046 | 529 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL355838.1-201 | ENST00000554814 | 559 nt | TSL 4 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL845552.1-201 | ENST00000556820 | 323 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | TTLL5-217 | ENST00000556893 | 3071 nt | TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC010325.1-202 | ENST00000562076 | 279 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC007494.1-201 | ENST00000562293 | 760 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC009145.2-201 | ENST00000562685 | 377 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | MRPS21P8-201 | ENST00000569196 | 235 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC007346.1-201 | ENST00000569208 | 867 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC233699.1-201 | ENST00000569955 | 1168 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC010401.2-202 | ENST00000570663 | 396 nt | TSL 2 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC024361.3-201 | ENST00000570919 | 333 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | STARD6-202 | ENST00000577499 | 696 nt | TSL 2 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC106037.2-201 | ENST00000578583 | 447 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | MIR4271-201 | ENST00000582451 | 67 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC011476.3-202 | ENST00000586845 | 553 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | GLYATL1P2-202 | ENST00000588046 | 902 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | TTN-AS1-226 | ENST00000588716 | 604 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | LINC01533-204 | ENST00000590719 | 435 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC012370.2-201 | ENST00000597541 | 1080 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC011468.3-201 | ENST00000597886 | 332 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | RMDN2-AS1-203 | ENST00000601029 | 613 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC141002.1-201 | ENST00000607025 | 279 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | LINC02362-201 | ENST00000608785 | 516 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | LINC00484-208 | ENST00000609752 | 591 nt | TSL 4 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | LINC02362-202 | ENST00000610683 | 724 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC022106.1-201 | ENST00000612834 | 766 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL031658.2-201 | ENST00000616850 | 651 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL512652.1-201 | ENST00000619006 | 500 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AL683826.1-201 | ENST00000624104 | 627 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC084816.1-204 | ENST00000628326 | 631 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | SUPT3H-206 | ENST00000637763 | 498 nt | TSL 3 BASIC | 1.87 | □□□□□ -2.11 | | |
| MT1A | P04731 | AC116667.2-201 | ENST00000641075 | 823 nt | BASIC | 1.87 | □□□□□ -2.11 | | |