Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.53□□□□□ -1.36
APOEP02649 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
APOEP02649 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
APOEP02649 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
APOEP02649 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.53□□□□□ -1.36
APOEP02649 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
APOEP02649 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
APOEP02649 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
APOEP02649 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
APOEP02649 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.52□□□□□ -1.37
APOEP02649 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
APOEP02649 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.52□□□□□ -1.37
APOEP02649 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.52□□□□□ -1.37
APOEP02649 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
APOEP02649 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 RNA5SP346-201ENST00000363541 121 ntBASIC6.52□□□□□ -1.37
APOEP02649 RN7SKP237-201ENST00000364663 301 ntBASIC6.52□□□□□ -1.37
APOEP02649 RNA5SP279-201ENST00000365513 117 ntBASIC6.52□□□□□ -1.37
APOEP02649 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 LCN1P2-201ENST00000372030 223 ntBASIC6.52□□□□□ -1.37
APOEP02649 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
APOEP02649 RN7SKP121-201ENST00000410842 305 ntBASIC6.52□□□□□ -1.37
APOEP02649 RPS17P17-201ENST00000419392 409 ntBASIC6.52□□□□□ -1.37
APOEP02649 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 OR5W1P-201ENST00000423705 938 ntBASIC6.52□□□□□ -1.37
APOEP02649 AC108479.1-201ENST00000431142 427 ntBASIC6.52□□□□□ -1.37
APOEP02649 AL354893.1-201ENST00000433735 348 ntBASIC6.52□□□□□ -1.37
APOEP02649 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 MORF4-201ENST00000447135 971 ntBASIC6.52□□□□□ -1.37
APOEP02649 RANP2-201ENST00000456833 229 ntBASIC6.52□□□□□ -1.37
APOEP02649 MARK2P8-201ENST00000476069 952 ntBASIC6.52□□□□□ -1.37
APOEP02649 SNX18P24-201ENST00000505249 671 ntBASIC6.52□□□□□ -1.37
APOEP02649 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.52□□□□□ -1.37
APOEP02649 MAST4-IT1-201ENST00000514241 658 ntBASIC6.52□□□□□ -1.37
APOEP02649 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.52□□□□□ -1.37
APOEP02649 RNA5SP400-201ENST00000517155 111 ntBASIC6.52□□□□□ -1.37
APOEP02649 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.52□□□□□ -1.37
APOEP02649 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 NATP-201ENST00000523491 878 ntBASIC6.52□□□□□ -1.37
APOEP02649 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.52□□□□□ -1.37
APOEP02649 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
APOEP02649 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.52□□□□□ -1.37
APOEP02649 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 AC004232.2-201ENST00000574245 821 ntBASIC6.52□□□□□ -1.37
APOEP02649 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 AC006924.1-201ENST00000610750 559 ntBASIC6.52□□□□□ -1.37
APOEP02649 MIR7109-201ENST00000613748 65 ntBASIC6.52□□□□□ -1.37
APOEP02649 AC010998.3-201ENST00000613871 631 ntBASIC6.52□□□□□ -1.37
APOEP02649 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.52□□□□□ -1.37
APOEP02649 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.52□□□□□ -1.37
APOEP02649 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
APOEP02649 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.52□□□□□ -1.37
APOEP02649 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
APOEP02649 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
APOEP02649 AC068769.1-201ENST00000474767 2426 ntBASIC6.51□□□□□ -1.37
APOEP02649 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
APOEP02649 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
APOEP02649 AL353763.1-201ENST00000624467 1628 ntBASIC6.51□□□□□ -1.37
APOEP02649 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 DNM1P47-203ENST00000571780 12667 ntBASIC6.51□□□□□ -1.37
APOEP02649 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.51□□□□□ -1.37
APOEP02649 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.51□□□□□ -1.37
APOEP02649 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 AL451046.1-201ENST00000406097 534 ntBASIC6.51□□□□□ -1.37
APOEP02649 MIR1275-201ENST00000408770 80 ntBASIC6.51□□□□□ -1.37
APOEP02649 RNU2-18P-201ENST00000411224 162 ntBASIC6.51□□□□□ -1.37
APOEP02649 CYP4F30P-202ENST00000420048 405 ntBASIC6.51□□□□□ -1.37
APOEP02649 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.51□□□□□ -1.37
APOEP02649 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.51□□□□□ -1.37
APOEP02649 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.51□□□□□ -1.37
APOEP02649 AC092967.1-201ENST00000449016 481 ntBASIC6.51□□□□□ -1.37
APOEP02649 RN7SL168P-201ENST00000463821 279 ntBASIC6.51□□□□□ -1.37
APOEP02649 AC021006.1-201ENST00000489849 553 ntBASIC6.51□□□□□ -1.37
APOEP02649 AC095052.1-201ENST00000509955 863 ntBASIC6.51□□□□□ -1.37
APOEP02649 HMGN1P17-201ENST00000513734 295 ntBASIC6.51□□□□□ -1.37
APOEP02649 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.51□□□□□ -1.37
APOEP02649 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.51□□□□□ -1.37
APOEP02649 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
APOEP02649 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.51□□□□□ -1.37
APOEP02649 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.51□□□□□ -1.37
APOEP02649 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms