Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
TRIM38O00635 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM38O00635 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM38O00635 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.59□□□□□ -1.36
TRIM38O00635 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.59□□□□□ -1.36
TRIM38O00635 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM38O00635 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
TRIM38O00635 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 OR6K3-202ENST00000368146 996 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AL451142.1-201ENST00000375867 775 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 RNU11-6P-201ENST00000391127 133 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 AL359694.1-201ENST00000403247 604 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AMZ2P2-201ENST00000406819 1057 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 MRPS21P5-201ENST00000417885 231 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 AC093166.3-201ENST00000448785 303 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 RARRES2P3-201ENST00000457739 473 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 AC005017.1-201ENST00000482002 490 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 RPL7AP23-201ENST00000482625 776 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AC021006.1-201ENST00000489849 553 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 RPS26P24-201ENST00000497656 331 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AC112484.3-201ENST00000505910 329 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AC093870.1-201ENST00000506837 213 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 NPM1P21-201ENST00000513394 762 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 SETP21-201ENST00000514799 892 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 RNU6-319P-201ENST00000516025 108 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM38O00635 AC074029.2-201ENST00000551045 634 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 ANP32BP1-202ENST00000568553 737 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 CTSLP2-201ENST00000580501 394 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 AL589765.6-201ENST00000601909 549 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM38O00635 AC073111.2-201ENST00000605657 1075 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM38O00635 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 MIR6721-201ENST00000617181 87 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 MIR1910-201ENST00000636955 80 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 AC010325.3-201ENST00000641084 394 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 MAPK10-350ENST00000641777 965 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 MTCO1P25-201ENST00000414449 1799 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM38O00635 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 TMCC1P1-201ENST00000518897 1980 ntBASIC6.58□□□□□ -1.36
TRIM38O00635 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM38O00635 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM38O00635 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM38O00635 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM38O00635 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TRIM38O00635 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TRIM38O00635 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 LINC01613-201ENST00000561476 2780 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM38O00635 STAG3L4-201ENST00000352103 530 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 RNA5SP65-201ENST00000363166 119 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 RNU1-55P-201ENST00000365510 158 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 U3.52-201ENST00000384034 216 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 PRELID1P1-201ENST00000403549 660 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 CYCSP17-201ENST00000407870 315 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM38O00635 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 GPN3P1-201ENST00000423883 535 ntBASIC6.57□□□□□ -1.36
TRIM38O00635 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM38O00635 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms