Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.63□□□□□ -1.35
O00370 RPA2P3-201ENST00000533268 770 ntBASIC6.63□□□□□ -1.35
O00370 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.63□□□□□ -1.35
O00370 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.63□□□□□ -1.35
O00370 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.63□□□□□ -1.35
O00370 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.63□□□□□ -1.35
O00370 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.63□□□□□ -1.35
O00370 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
O00370 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
O00370 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.63□□□□□ -1.35
O00370 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
O00370 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
O00370 AC092692.1-201ENST00000623625 2595 ntBASIC6.63□□□□□ -1.35
O00370 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
O00370 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
O00370 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
O00370 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
O00370 AL078595.2-201ENST00000605309 1780 ntBASIC6.62□□□□□ -1.35
O00370 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
O00370 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
O00370 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.62□□□□□ -1.35
O00370 AC123912.3-201ENST00000600907 1367 ntBASIC6.62□□□□□ -1.35
O00370 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.62□□□□□ -1.35
O00370 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
O00370 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
O00370 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
O00370 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
O00370 RN7SKP108-201ENST00000411367 328 ntBASIC6.62□□□□□ -1.35
O00370 AK3P5-201ENST00000432033 519 ntBASIC6.62□□□□□ -1.35
O00370 GAPDHP59-201ENST00000435908 267 ntBASIC6.62□□□□□ -1.35
O00370 AL645936.1-201ENST00000441979 518 ntBASIC6.62□□□□□ -1.35
O00370 AC016908.1-201ENST00000442571 1219 ntBASIC6.62□□□□□ -1.35
O00370 OR13K1P-201ENST00000444577 975 ntBASIC6.62□□□□□ -1.35
O00370 HIGD1AP16-201ENST00000450986 258 ntBASIC6.62□□□□□ -1.35
O00370 EIF4E2P2-201ENST00000492033 736 ntBASIC6.62□□□□□ -1.35
O00370 RN7SL362P-201ENST00000494228 267 ntBASIC6.62□□□□□ -1.35
O00370 SNX18P25-201ENST00000510539 758 ntBASIC6.62□□□□□ -1.35
O00370 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.62□□□□□ -1.35
O00370 HMGN1P17-201ENST00000513734 295 ntBASIC6.62□□□□□ -1.35
O00370 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.62□□□□□ -1.35
O00370 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.62□□□□□ -1.35
O00370 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.62□□□□□ -1.35
O00370 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.62□□□□□ -1.35
O00370 AL078601.3-201ENST00000573303 535 ntBASIC6.62□□□□□ -1.35
O00370 OR1E3-201ENST00000575608 948 ntBASIC6.62□□□□□ -1.35
O00370 RN7SL230P-201ENST00000580835 303 ntBASIC6.62□□□□□ -1.35
O00370 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.62□□□□□ -1.35
O00370 AL021368.3-201ENST00000607119 578 ntBASIC6.62□□□□□ -1.35
O00370 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.62□□□□□ -1.35
O00370 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.62□□□□□ -1.35
O00370 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.62□□□□□ -1.35
O00370 AC111152.1-202ENST00000635848 339 ntBASIC6.62□□□□□ -1.35
O00370 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
O00370 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
O00370 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
O00370 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
O00370 AP001541.1-201ENST00000623322 1904 ntBASIC6.62□□□□□ -1.35
O00370 AC010401.2-201ENST00000575137 4934 ntBASIC6.61□□□□□ -1.35
O00370 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
O00370 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
O00370 AC018717.1-201ENST00000457712 1505 ntBASIC6.61□□□□□ -1.35
O00370 MSL3P1-202ENST00000440028 1468 ntBASIC6.61□□□□□ -1.35
O00370 AOX3P-204ENST00000491025 2107 ntBASIC6.61□□□□□ -1.35
O00370 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
O00370 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
O00370 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
O00370 SNORA43.1-201ENST00000364863 140 ntBASIC6.61□□□□□ -1.35
O00370 YWHAZP6-201ENST00000399764 738 ntBASIC6.61□□□□□ -1.35
O00370 AL035422.1-201ENST00000414193 397 ntBASIC6.61□□□□□ -1.35
O00370 AL359885.1-201ENST00000415786 903 ntBASIC6.61□□□□□ -1.35
O00370 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.61□□□□□ -1.35
O00370 AL139158.1-201ENST00000424719 340 ntBASIC6.61□□□□□ -1.35
O00370 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.61□□□□□ -1.35
O00370 PPIAP10-201ENST00000438675 458 ntBASIC6.61□□□□□ -1.35
O00370 AL590004.3-202ENST00000445883 451 ntBASIC6.61□□□□□ -1.35
O00370 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.61□□□□□ -1.35
O00370 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.61□□□□□ -1.35
O00370 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.61□□□□□ -1.35
O00370 SNX18P24-201ENST00000505249 671 ntBASIC6.61□□□□□ -1.35
O00370 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.61□□□□□ -1.35
O00370 AC095052.1-201ENST00000509955 863 ntBASIC6.61□□□□□ -1.35
O00370 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.61□□□□□ -1.35
O00370 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
O00370 RNA5SP400-201ENST00000517155 111 ntBASIC6.61□□□□□ -1.35
O00370 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
O00370 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.61□□□□□ -1.35
O00370 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.61□□□□□ -1.35
O00370 OR4H6P-201ENST00000563771 921 ntBASIC6.61□□□□□ -1.35
O00370 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
O00370 AC004232.2-201ENST00000574245 821 ntBASIC6.61□□□□□ -1.35
O00370 NPIPB1P-202ENST00000588786 828 ntBASIC6.61□□□□□ -1.35
O00370 AC005828.7-201ENST00000607331 556 ntBASIC6.61□□□□□ -1.35
O00370 AC006600.2-201ENST00000624834 2506 ntBASIC6.61□□□□□ -1.35
O00370 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
O00370 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
O00370 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
O00370 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms