Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 RNU1-49P-201ENST00000363468 159 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 RPL23AP17-201ENST00000401064 499 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 GABARAPL3-201ENST00000412799 354 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC112492.2-201ENST00000432774 1030 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AL645939.3-201ENST00000435408 225 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC013410.1-201ENST00000436223 1232 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC234771.4-201ENST00000441416 730 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 OR52Y1P-201ENST00000452418 828 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AL133351.3-201ENST00000454998 193 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC093827.1-201ENST00000480094 861 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 OR4D12P-201ENST00000509361 911 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC139713.1-202ENST00000512366 460 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC131935.1-201ENST00000524621 333 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 MIR4732-201ENST00000581873 76 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC004890.3-201ENST00000605566 1095 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AL390877.1-201ENST00000605704 214 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC144521.1-201ENST00000607148 956 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC010998.3-201ENST00000613871 631 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC068213.1-201ENST00000625124 226 ntBASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 VIM2P-201ENST00000402383 1294 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RNU2-72P-201ENST00000411175 163 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RPL23AP18-201ENST00000416139 468 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AL356806.1-201ENST00000422524 916 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 KIF4CP-201ENST00000422742 1279 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC092651.1-201ENST00000426110 312 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RPL34P27-201ENST00000428810 349 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 ARMC4P1-201ENST00000438905 707 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RPL7L1P3-201ENST00000455249 689 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RN7SL326P-201ENST00000477493 296 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RN7SL267P-201ENST00000485107 261 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RPL37AP8-201ENST00000494116 276 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RN7SL104P-201ENST00000498686 293 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 SNX18P24-201ENST00000505249 671 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC093325.1-201ENST00000508378 326 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 RN7SKP67-201ENST00000515905 235 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC090286.3-201ENST00000573133 187 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC026898.1-201ENST00000586404 571 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 MIR132-201ENST00000591554 101 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 DYNLL1P1-201ENST00000595442 269 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms