Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SL82P-201ENST00000611435 237 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AL353726.1-201ENST00000614041 1000 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SL301P-202ENST00000618767 298 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SL628P-201ENST00000619139 237 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 CR383658.2-201ENST00000547576 1525 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC114324.1-201ENST00000504077 3152 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 Z83820.1-201ENST00000456978 1499 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 TUBBP10-201ENST00000427668 1301 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 DDX11L16-201ENST00000507418 1306 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 Y_RNA.38-201ENST00000362617 102 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 SNORA71D-201ENST00000363484 134 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 SNORD65.1-201ENST00000390889 71 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 RNU6-876P-201ENST00000391295 104 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MIR1231-201ENST00000408101 92 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SKP285-201ENST00000410137 318 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 RNU2-5P-201ENST00000410533 180 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CDC42P6-201ENST00000421246 576 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC006065.1-201ENST00000422539 802 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 RPS25P9-201ENST00000435591 252 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 RPL7P24-201ENST00000493052 752 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC113208.1-201ENST00000497944 318 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 ADI1P2-201ENST00000514945 429 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC079598.4-201ENST00000549647 265 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SL154P-201ENST00000578043 324 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MIR3714-201ENST00000579507 65 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MIR548AB-201ENST00000584917 84 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 OR7A18P-201ENST00000600416 277 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC010719.1-201ENST00000602992 747 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC243772.3-202ENST00000609662 1148 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AP000894.4-201ENST00000610185 483 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC084876.1-201ENST00000612793 641 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC091834.1-201ENST00000614543 472 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC002553.4-201ENST00000616896 331 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AC090181.3-201ENST00000624777 1514 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PCDHB11Q9Y5F2 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AL136146.1-201ENST00000529830 1667 ntBASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PCDHB11Q9Y5F2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms