Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL121579.2-201ENST00000555466 590 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 WBP1LP11-201ENST00000586141 328 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AL008723.3-201ENST00000608926 449 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC024255.1-201ENST00000614376 102 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 MIR6811-201ENST00000620409 58 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC092451.3-201ENST00000625067 1343 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC130360.2-201ENST00000533477 1556 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TRAPPC4Q9Y296 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRAPPC4Q9Y296 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AOX3P-204ENST00000491025 2107 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AL136984.1-201ENST00000607611 1893 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 SNORA64.3-201ENST00000365647 134 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 PRELID1P1-201ENST00000403549 660 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 UBE2V1P14-201ENST00000415815 558 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC002127.1-201ENST00000421305 225 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC092601.1-201ENST00000444526 383 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 MORF4-201ENST00000447135 971 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 RPL7L1P3-201ENST00000455249 689 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL221P-201ENST00000466190 281 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 RPL12P31-201ENST00000478433 450 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 OR9A1P-202ENST00000484361 945 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL714P-201ENST00000487050 298 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC117500.1-201ENST00000497352 755 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 NPM1P42-201ENST00000560329 862 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 ARGFXP2-201ENST00000579304 949 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC005332.4-201ENST00000592752 579 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC063977.7-201ENST00000594454 337 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AL589863.1-201ENST00000595383 631 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AL589765.6-201ENST00000601909 549 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 HTR1DP1-201ENST00000616500 888 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC069234.4-201ENST00000621276 412 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC089999.3-201ENST00000622440 577 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC009120.7-201ENST00000623452 780 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AC022726.2-201ENST00000634673 547 ntBASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.71□□□□□ -1.5
TRAPPC4Q9Y296 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AC114876.1-201ENST00000490962 1366 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 LINC01613-201ENST00000561476 2780 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms