Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 NDUFA5P12-201ENST00000503796 343 ntBASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 WBP1LP3-201ENST00000523033 208 ntBASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 PCNAP4-201ENST00000532690 730 ntBASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 DPPA2P4-201ENST00000563717 878 ntBASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC131649.2-201ENST00000624925 4439 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC092821.2-201ENST00000545710 2042 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 SELE-203ENST00000367775 3389 ntTSL 5 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 OR10R3P-201ENST00000361688 942 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 BMS1P17-202ENST00000416720 316 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC015977.1-201ENST00000418887 292 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC073594.1-201ENST00000462065 364 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC006499.3-201ENST00000506077 748 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 OR5M14P-201ENST00000506803 618 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 OR7E158P-201ENST00000524483 910 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 OR10G5P-201ENST00000532733 358 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC006530.1-201ENST00000555980 571 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AC037198.3-201ENST00000616754 526 ntBASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
SHANK2Q9UPX8 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 PDZK1P1-202ENST00000425209 1350 ntBASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 MALAT1-202ENST00000534336 8708 ntBASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 SNORA64.1-201ENST00000362600 132 ntBASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 OR13K1P-201ENST00000444577 975 ntBASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 RPS17P15-201ENST00000475609 349 ntBASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC9.01□□□□□ -0.97
SHANK2Q9UPX8 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 C4BPAP1-201ENST00000415474 1893 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 AL391422.1-201ENST00000402155 436 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 NPM1P4-201ENST00000414095 812 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 AL596448.1-201ENST00000415024 392 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 AC092017.2-201ENST00000427600 362 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 OR56A7P-201ENST00000524865 941 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 SETP3-201ENST00000581726 813 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
SHANK2Q9UPX8 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 LINC01616-201ENST00000561816 2280 ntBASIC9□□□□□ -0.97
SHANK2Q9UPX8 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SHANK2Q9UPX8 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SHANK2Q9UPX8 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms