Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RPS4XP21-201ENST00000603814 750 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 NDUFB9P1-201ENST00000604683 510 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC100767.2-201ENST00000604840 693 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC091965.4-201ENST00000607691 587 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC126118.1-201ENST00000607744 628 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC079395.2-201ENST00000610982 737 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC015660.5-201ENST00000623238 564 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 OR11H2-202ENST00000641517 1085 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL356317.1-201ENST00000396110 1436 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC027279.4-201ENST00000624371 2072 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL132640.2-201ENST00000559968 1698 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 RNU1-65P-201ENST00000363919 148 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 RN7SKP191-201ENST00000364713 306 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 EIF4A1P1-201ENST00000420241 934 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 MTCO2P19-201ENST00000427513 598 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 BX119321.1-201ENST00000428912 797 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 USP9YP35-201ENST00000435696 412 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC097527.1-201ENST00000437031 530 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC009518.3-201ENST00000438972 253 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC092641.1-201ENST00000440229 772 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 RPSAP40-201ENST00000442343 891 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 EEF1B2P3-201ENST00000447718 678 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL627224.1-201ENST00000448334 444 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC233982.1-201ENST00000451247 436 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 OR2AF1P-201ENST00000454899 889 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 RNU6-956P-201ENST00000458868 103 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 RPL9P33-201ENST00000484311 566 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC021087.2-201ENST00000504656 1203 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC116353.2-201ENST00000505332 712 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC006539.2-201ENST00000601729 572 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL356986.1-201ENST00000604085 341 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 RN7SL715P-201ENST00000606972 286 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AC022150.4-201ENST00000598322 2848 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 AL158152.1-201ENST00000602652 1435 ntBASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ZC3H4Q9UPT8 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms