Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC125494.3-201ENST00000602759 455 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC129492.5-201ENST00000603489 315 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AL031775.1-201ENST00000607014 887 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC103974.2-201ENST00000611319 778 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC007671.1-201ENST00000616957 830 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC244258.1-201ENST00000637553 1071 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC068137.3-201ENST00000639191 341 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC073869.6-201ENST00000640656 341 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AL021877.2-201ENST00000624442 10684 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AC008957.3-201ENST00000624112 2242 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 TRIM60P14-201ENST00000513444 1419 ntBASIC7.17□□□□□ -1.26
SSU72Q9NP77 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSU72Q9NP77 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.17□□□□□ -1.26
SSU72Q9NP77 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC012020.1-201ENST00000624541 1728 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC097634.1-201ENST00000604491 2467 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 RNU6-694P-201ENST00000364071 147 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 RNU6-157P-201ENST00000383957 107 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 Y_RNA.553-201ENST00000384670 102 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 RNU6-932P-201ENST00000391108 106 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 OOSP1-201ENST00000398992 1270 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 HSPD1P16-201ENST00000402302 394 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 FCF1P9-201ENST00000412546 282 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 GNAI2P2-201ENST00000417003 916 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 CYP4F62P-201ENST00000417310 524 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 GLUD1P9-201ENST00000420997 1173 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 GTF2IP2-201ENST00000424290 697 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 RAB9AP5-201ENST00000437794 597 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 EFCAB14P1-201ENST00000442409 463 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 MTCO1P19-201ENST00000443487 500 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 RAB9AP2-201ENST00000443911 597 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 BUD31P2-201ENST00000449374 300 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 OR2AF1P-201ENST00000454899 889 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC117382.1-201ENST00000468074 730 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC023245.1-201ENST00000468501 517 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC109454.1-201ENST00000471205 498 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC011825.1-201ENST00000484967 388 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 C1GALT1P3-201ENST00000522049 819 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC087465.1-201ENST00000560574 245 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AL121834.1-201ENST00000572284 509 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 MIR4301-201ENST00000577203 66 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 PRELID3BP3-201ENST00000584963 545 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC073544.2-201ENST00000601155 540 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AL583832.1-201ENST00000603227 784 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC019322.2-201ENST00000605634 147 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 MIR6761-201ENST00000617899 72 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms