Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 ARMC4P1-201ENST00000438905 707 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC079922.1-201ENST00000443291 359 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC097359.1-201ENST00000447946 463 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 RN7SL39P-201ENST00000462264 297 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 RN7SL643P-201ENST00000471845 291 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC021006.1-201ENST00000489849 553 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC010343.2-201ENST00000510162 224 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 RPA2P3-201ENST00000533268 770 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC084121.1-201ENST00000533882 835 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC007494.1-201ENST00000562293 760 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC025283.1-201ENST00000572039 734 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 RNU4ATAC-201ENST00000580972 127 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AC027334.1-201ENST00000603257 310 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AL591167.1-201ENST00000607321 456 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AP003789.1-201ENST00000617737 605 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AP004289.1-201ENST00000436307 2205 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 ZNF658B-201ENST00000602828 3408 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 SNORA43.1-201ENST00000364863 140 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 RN7SKP121-201ENST00000410842 305 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AL354707.3-201ENST00000427308 331 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC115283.1-201ENST00000427353 400 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC112492.2-201ENST00000432774 1030 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 HMGN1P2-201ENST00000445197 310 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 NDUFA5P5-201ENST00000468361 342 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC113367.2-201ENST00000505749 160 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 SCARNA21.2-201ENST00000516600 166 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 IGLVIV-64-201ENST00000518581 301 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC135983.3-201ENST00000528049 1226 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AP004609.2-201ENST00000532177 190 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC090651.1-201ENST00000567865 634 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC012368.3-201ENST00000604190 219 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC022106.1-201ENST00000612834 766 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC089999.3-201ENST00000622440 577 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 AC116667.2-201ENST00000641075 823 ntBASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.4□□□□□ -1.22
UPF3BQ9BZI7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
UPF3BQ9BZI7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
UPF3BQ9BZI7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.4□□□□□ -1.23
UPF3BQ9BZI7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
UPF3BQ9BZI7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
UPF3BQ9BZI7 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 IFIT1P1-201ENST00000400497 1449 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 RNA5SP77-201ENST00000365394 120 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 RN7SKP240-201ENST00000410583 375 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC015977.1-201ENST00000418887 292 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 OSTCP4-201ENST00000424397 449 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 MORF4-201ENST00000447135 971 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AL133351.3-201ENST00000454998 193 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC094085.1-201ENST00000468914 584 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC005017.1-201ENST00000482002 490 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 MTND6P8-201ENST00000503471 522 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC008945.1-201ENST00000505144 499 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms