Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RN7SKP121-201ENST00000410842 305 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 HLA-DPA3-207ENST00000454398 229 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC103563.5-201ENST00000455643 364 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 SETP20-201ENST00000457046 852 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 OR4H6P-201ENST00000563771 921 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC027229.1-201ENST00000583887 253 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC119501.1-201ENST00000603646 475 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AP001823.1-201ENST00000604056 1003 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AL591167.1-201ENST00000607321 456 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC010998.3-201ENST00000613871 631 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 GUCY1B2-204ENST00000531898 1979 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 SNORD8-201ENST00000363915 110 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 CDY17P-201ENST00000414121 1282 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC104843.2-201ENST00000427666 297 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC023194.2-201ENST00000465398 406 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AL158068.1-201ENST00000506116 616 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 MIR3614-201ENST00000581261 86 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC100767.2-201ENST00000604840 693 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC026124.2-201ENST00000621847 656 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AC129778.1-202ENST00000623812 261 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AL591379.1-207ENST00000635982 261 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 MIR4302-201ENST00000638058 60 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 NBPF8-201ENST00000583271 5330 ntBASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
RPAP1Q9BWH6 AP004289.1-201ENST00000436307 2205 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 RNA5SP478-201ENST00000364657 115 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 RNU11-6P-201ENST00000391127 133 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 SLC20A1P1-201ENST00000413906 956 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 H3F3BP1-201ENST00000440551 403 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 RNA5SP116-201ENST00000516132 98 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AC008521.2-201ENST00000591021 259 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AC068768.2-201ENST00000602352 343 ntBASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.53□□□□□ -1.2
RPAP1Q9BWH6 AL512652.1-201ENST00000619006 500 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms