Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
VPS50Q96JG6 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS50Q96JG6 AC011455.2-201ENST00000599320 3336 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC020658.2-201ENST00000559030 4020 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 THAP12P8-201ENST00000447914 2115 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC006213.6-201ENST00000623722 4179 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AL663061.1-201ENST00000416625 580 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC013268.2-201ENST00000420753 337 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 SPATA20P1-201ENST00000423089 438 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AL596268.1-201ENST00000427910 1048 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 UBE2V1P6-201ENST00000430840 422 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 MORF4L1P4-201ENST00000450245 976 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AP000805.1-201ENST00000471604 784 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 RN7SL379P-201ENST00000479912 293 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 RN7SL561P-201ENST00000488553 281 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 MTND3P24-201ENST00000506306 329 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 GOLGA5P1-201ENST00000507317 980 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 PPIAP6-201ENST00000557078 499 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 HMGN2P47-201ENST00000559378 272 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 RN7SL199P-201ENST00000578752 281 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 RN7SL656P-201ENST00000579044 281 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 RN7SL404P-201ENST00000582421 281 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 AL953862.2-201ENST00000603089 820 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 OR4H6P-202ENST00000603819 340 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 BNIP3P19-201ENST00000605397 577 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 AL139022.2-201ENST00000606934 443 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 OR7M1P-201ENST00000608946 533 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 AC211486.4-201ENST00000621495 113 ntBASIC6.43□□□□□ -1.38
VPS50Q96JG6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS50Q96JG6 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS50Q96JG6 HSPD1P8-201ENST00000400121 1658 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC006511.3-201ENST00000624929 1783 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AP001002.1-201ENST00000625148 1513 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC010894.1-201ENST00000313760 361 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 RPL24P4-201ENST00000326586 421 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS50Q96JG6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 UBBP1-201ENST00000392399 473 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AL353133.1-201ENST00000407695 401 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 RN7SKP221-201ENST00000410420 301 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC096537.2-201ENST00000413707 714 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS50Q96JG6 AC021876.1-201ENST00000425959 359 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 ETF1P1-206ENST00000427296 984 ntBASIC6.42□□□□□ -1.38
VPS50Q96JG6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms