Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AL451142.1-201ENST00000375867 775 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC087752.1-201ENST00000391360 558 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 NMD3P2-201ENST00000421815 761 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 RPS7P14-201ENST00000426405 583 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 CDY8P-201ENST00000428380 1279 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AL022237.1-201ENST00000446663 358 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 MORF4-201ENST00000447135 971 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC097463.1-201ENST00000447288 481 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 CDY20P-201ENST00000447528 1279 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC103563.5-201ENST00000455643 364 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC024255.1-201ENST00000614376 102 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC016769.4-201ENST00000616893 535 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC103703.1-201ENST00000634783 663 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 AC005725.1-201ENST00000577346 2607 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
SHROOM3Q8TF72 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
SHROOM3Q8TF72 AC119674.1-202ENST00000641333 1860 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AL360013.1-201ENST00000419031 858 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AL590004.3-202ENST00000445883 451 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 RPL31P15-201ENST00000449770 338 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 PPIAP27-201ENST00000453800 265 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 RN7SL254P-201ENST00000460609 284 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC007494.1-201ENST00000562293 760 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 OR7E18P-201ENST00000592589 702 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC003992.1-201ENST00000635364 557 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AL353763.1-201ENST00000624467 1628 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 OR52I1-201ENST00000450052 1050 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 HMGB1P7-201ENST00000450921 612 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AL445687.2-201ENST00000458156 728 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AL035690.1-201ENST00000490892 383 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC006499.4-201ENST00000510947 694 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 ZNF519P4-201ENST00000514008 125 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 RNA5SP400-201ENST00000517155 111 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 BNIP3P32-201ENST00000600015 554 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC073333.2-201ENST00000603589 769 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 AC053481.2-202ENST00000582394 1500 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 USP9YP3-201ENST00000434481 1766 ntBASIC6.33□□□□□ -1.4
SHROOM3Q8TF72 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 AC024587.1-201ENST00000505925 2157 ntBASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 CDY17P-201ENST00000414121 1282 ntBASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 MARK2P12-201ENST00000420129 585 ntBASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.32□□□□□ -1.4
SHROOM3Q8TF72 H3F3AP5-201ENST00000475267 429 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms