Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC027229.1-201ENST00000583887 253 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 MIR132-201ENST00000591554 101 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 MIR7159-201ENST00000620587 66 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 MAPK10-350ENST00000641777 965 ntBASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC112Q8NEF3 AC004023.1-201ENST00000561473 1744 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 MRPS6P2-201ENST00000381143 370 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 ARSFP1-201ENST00000398758 477 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 MIR1266-201ENST00000408125 84 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AC099535.1-201ENST00000408928 371 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 RNU2-18P-201ENST00000411224 162 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 MED28P4-201ENST00000433137 572 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AC096632.2-201ENST00000438139 1239 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 KF459542.1-201ENST00000450908 553 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AC022080.2-201ENST00000452932 533 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 RPS7P11-201ENST00000484240 586 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AC139713.1-202ENST00000512366 460 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AP000619.2-201ENST00000546014 969 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 BMS1P16-201ENST00000556075 1147 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AC036176.3-201ENST00000602456 418 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 SNORD96A-201ENST00000606577 79 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 CLUHP10-201ENST00000631979 980 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 AP002833.3-201ENST00000625075 2265 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 PPBPP2-201ENST00000513150 1362 ntBASIC6.81□□□□□ -1.32
CCDC112Q8NEF3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 NCOA4P2-201ENST00000340589 1813 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 RN7SKP205-201ENST00000410999 307 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AP003385.1-201ENST00000426387 893 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 RPS3AP38-201ENST00000435889 763 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AL359091.1-201ENST00000449048 1734 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC005165.2-201ENST00000466070 380 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC092349.1-201ENST00000504903 310 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC079248.1-201ENST00000427568 1546 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 AC027279.4-201ENST00000624371 2072 ntBASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC112Q8NEF3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 PPIAP24-201ENST00000328558 471 ntBASIC6.79□□□□□ -1.32
CCDC112Q8NEF3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms