Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC024085.1-201ENST00000604299 432 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC023513.1-201ENST00000604396 691 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC092354.1-201ENST00000606057 376 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AL136981.2-201ENST00000617319 734 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AP005901.5-201ENST00000545779 1796 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 XRCC6P3-201ENST00000422187 1621 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 FOLH1B-202ENST00000529567 2145 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 Z83820.1-201ENST00000456978 1499 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 CDY11P-201ENST00000447168 1651 ntBASIC8.24□□□□□ -1.09
RNF135Q8IUD6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF135Q8IUD6 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 ZNF101P1-201ENST00000435701 1720 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 OR4G2P-201ENST00000328113 903 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 SOD1P1-201ENST00000407803 440 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 RPL24P2-201ENST00000421023 475 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 RPSAP32-201ENST00000432681 526 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 VN1R54P-201ENST00000435210 1049 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 FO393419.1-201ENST00000443746 355 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC097499.1-201ENST00000444277 208 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC010240.2-201ENST00000445363 1205 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 ST13P20-201ENST00000447996 1065 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 MTCO1P48-201ENST00000448024 1096 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 SNRPGP9-201ENST00000456025 225 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 OR11I1P-201ENST00000486033 954 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 MYL12BP2-201ENST00000503948 512 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC006499.4-201ENST00000510947 694 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC109471.1-201ENST00000511631 612 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC084757.1-201ENST00000559987 490 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 LSM1P2-201ENST00000604911 322 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC091946.2-201ENST00000606105 291 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC011374.2-201ENST00000607135 526 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC099676.1-201ENST00000608886 657 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC006566.1-201ENST00000608943 513 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC092954.2-201ENST00000609103 430 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC135050.6-202ENST00000613584 392 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC135068.5-201ENST00000624197 983 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 RPSAP68-201ENST00000625020 438 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 AC105046.1-201ENST00000566457 4997 ntBASIC8.23□□□□□ -1.09
RNF135Q8IUD6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF135Q8IUD6 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms