Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RN7SKP250-201ENST00000363924 321 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RN7SKP171-201ENST00000364417 303 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 DEFB108C-201ENST00000400154 252 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RN7SKP205-201ENST00000410999 307 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RAC1P4-201ENST00000419413 579 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC002069.1-201ENST00000429649 1159 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL354714.5-201ENST00000450131 590 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC004815.1-201ENST00000484185 331 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 LINC00888-204ENST00000487386 421 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 GTF2F2P1-201ENST00000511083 675 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RNU6-319P-201ENST00000516025 108 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 SCARNA15.1-201ENST00000516384 125 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL139174.1-201ENST00000531489 886 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 OR8L1P-201ENST00000534005 955 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC022146.1-201ENST00000595307 847 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AP003392.5-201ENST00000607857 415 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 MIR7109-201ENST00000613748 65 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC009509.4-201ENST00000619202 509 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC090643.1-201ENST00000623600 3100 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL078595.2-201ENST00000605309 1780 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RPL12P38-202ENST00000588627 2319 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AL590004.4-201ENST00000566733 7060 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 EEF1A1P21-201ENST00000512363 1344 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 EML5-201ENST00000380664 5910 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 THEM7P-201ENST00000419556 672 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 FBP2P1-202ENST00000424473 530 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AL392003.1-201ENST00000434394 243 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 RNF148-202ENST00000447240 839 ntTSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AP002371.1-201ENST00000463604 433 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 PGBD4P1-201ENST00000473644 407 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 MARK2P8-201ENST00000476069 952 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC092045.1-201ENST00000495716 1231 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC091965.2-201ENST00000512324 613 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 IGLC4-201ENST00000517690 248 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 TMEM97P2-201ENST00000517841 403 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 NDUFA5P2-201ENST00000519723 344 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 OR4A17P-201ENST00000526032 904 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 OR5AM1P-201ENST00000532136 1032 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 OR5BK1P-201ENST00000550421 823 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC084757.1-201ENST00000559987 490 ntBASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC9.13□□□□□ -0.95
RC3H1Q5TC82 VN1R82P-201ENST00000601481 356 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms