Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.47□□□□□ -1.53
VBP1P61758 RANP2-201ENST00000456833 229 ntBASIC5.47□□□□□ -1.53
VBP1P61758 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.47□□□□□ -1.53
VBP1P61758 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.47□□□□□ -1.53
VBP1P61758 AC124945.1-201ENST00000485133 188 ntBASIC5.47□□□□□ -1.53
VBP1P61758 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VBP1P61758 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VBP1P61758 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VBP1P61758 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VBP1P61758 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.47□□□□□ -1.53
VBP1P61758 AC010442.1-201ENST00000515583 816 ntBASIC5.47□□□□□ -1.53
VBP1P61758 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.47□□□□□ -1.53
VBP1P61758 AC021820.1-201ENST00000525564 808 ntBASIC5.47□□□□□ -1.53
VBP1P61758 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC5.47□□□□□ -1.53
VBP1P61758 OR7E1P-201ENST00000533891 958 ntBASIC5.47□□□□□ -1.53
VBP1P61758 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.47□□□□□ -1.53
VBP1P61758 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.47□□□□□ -1.53
VBP1P61758 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.47□□□□□ -1.53
VBP1P61758 COX6CP16-201ENST00000603667 216 ntBASIC5.47□□□□□ -1.53
VBP1P61758 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.47□□□□□ -1.53
VBP1P61758 AC138904.2-201ENST00000614412 107 ntBASIC5.47□□□□□ -1.53
VBP1P61758 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VBP1P61758 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VBP1P61758 AP001029.2-203ENST00000589795 4910 ntBASIC5.47□□□□□ -1.53
VBP1P61758 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VBP1P61758 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.47□□□□□ -1.53
VBP1P61758 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.47□□□□□ -1.53
VBP1P61758 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
VBP1P61758 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
VBP1P61758 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
VBP1P61758 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
VBP1P61758 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
VBP1P61758 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.46□□□□□ -1.54
VBP1P61758 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VBP1P61758 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 RN7SKP189-201ENST00000365042 330 ntBASIC5.46□□□□□ -1.54
VBP1P61758 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.46□□□□□ -1.54
VBP1P61758 OR6C64P-201ENST00000419708 825 ntBASIC5.46□□□□□ -1.54
VBP1P61758 VDAC2P3-201ENST00000430995 828 ntBASIC5.46□□□□□ -1.54
VBP1P61758 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.46□□□□□ -1.54
VBP1P61758 NPM1P18-201ENST00000434232 732 ntBASIC5.46□□□□□ -1.54
VBP1P61758 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC5.46□□□□□ -1.54
VBP1P61758 AP006193.1-201ENST00000440724 485 ntBASIC5.46□□□□□ -1.54
VBP1P61758 RPL5P25-201ENST00000441148 775 ntBASIC5.46□□□□□ -1.54
VBP1P61758 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.46□□□□□ -1.54
VBP1P61758 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.46□□□□□ -1.54
VBP1P61758 AC016489.1-201ENST00000461109 375 ntBASIC5.46□□□□□ -1.54
VBP1P61758 RN7SL352P-201ENST00000466002 277 ntBASIC5.46□□□□□ -1.54
VBP1P61758 RN7SL282P-201ENST00000479676 297 ntBASIC5.46□□□□□ -1.54
VBP1P61758 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.46□□□□□ -1.54
VBP1P61758 RN7SL182P-201ENST00000496499 300 ntBASIC5.46□□□□□ -1.54
VBP1P61758 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.46□□□□□ -1.54
VBP1P61758 AL671862.1-201ENST00000515851 349 ntBASIC5.46□□□□□ -1.54
VBP1P61758 IGKV2D-38-201ENST00000518423 240 ntBASIC5.46□□□□□ -1.54
VBP1P61758 SETP17-201ENST00000534163 817 ntBASIC5.46□□□□□ -1.54
VBP1P61758 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.46□□□□□ -1.54
VBP1P61758 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.46□□□□□ -1.54
VBP1P61758 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.46□□□□□ -1.54
VBP1P61758 AL589765.5-201ENST00000596133 515 ntBASIC5.46□□□□□ -1.54
VBP1P61758 AC104117.5-201ENST00000606195 547 ntBASIC5.46□□□□□ -1.54
VBP1P61758 SNORD96A-201ENST00000606577 79 ntBASIC5.46□□□□□ -1.54
VBP1P61758 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
VBP1P61758 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VBP1P61758 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.46□□□□□ -1.54
VBP1P61758 AC011933.2-201ENST00000578539 2790 ntBASIC5.46□□□□□ -1.54
VBP1P61758 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
VBP1P61758 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
VBP1P61758 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VBP1P61758 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 AL353743.3-201ENST00000442109 1468 ntBASIC5.45□□□□□ -1.54
VBP1P61758 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VBP1P61758 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 MTCO1P15-201ENST00000529569 1526 ntBASIC5.45□□□□□ -1.54
VBP1P61758 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.45□□□□□ -1.54
VBP1P61758 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VBP1P61758 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VBP1P61758 SNORD16-201ENST00000362803 99 ntBASIC5.45□□□□□ -1.54
VBP1P61758 RNU1-146P-201ENST00000364015 165 ntBASIC5.45□□□□□ -1.54
VBP1P61758 U3.14-201ENST00000365363 227 ntBASIC5.45□□□□□ -1.54
VBP1P61758 AC074375.1-201ENST00000372993 192 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms