Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 CCNT2P1-201ENST00000423082 1315 ntBASIC6.09□□□□□ -1.43
CDH13P55290 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH13P55290 AL033519.1-201ENST00000407266 307 ntBASIC6.09□□□□□ -1.43
CDH13P55290 RNA5SP231-201ENST00000410496 138 ntBASIC6.09□□□□□ -1.43
CDH13P55290 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH13P55290 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH13P55290 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH13P55290 AC112187.1-201ENST00000455837 479 ntBASIC6.09□□□□□ -1.43
CDH13P55290 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH13P55290 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 AC063955.1-201ENST00000462872 685 ntBASIC6.09□□□□□ -1.43
CDH13P55290 AL355032.1-201ENST00000472981 438 ntBASIC6.09□□□□□ -1.43
CDH13P55290 AC128716.1-201ENST00000475129 166 ntBASIC6.09□□□□□ -1.43
CDH13P55290 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH13P55290 OR52A4P-203ENST00000498233 1014 ntBASIC6.09□□□□□ -1.43
CDH13P55290 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.09□□□□□ -1.43
CDH13P55290 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH13P55290 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.09□□□□□ -1.43
CDH13P55290 AL589743.6-201ENST00000611025 117 ntBASIC6.09□□□□□ -1.43
CDH13P55290 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CDH13P55290 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CDH13P55290 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH13P55290 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
CDH13P55290 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
CDH13P55290 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDH13P55290 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CDH13P55290 RNA5SP85-201ENST00000365378 119 ntBASIC6.08□□□□□ -1.44
CDH13P55290 RN7SKP151-201ENST00000410230 316 ntBASIC6.08□□□□□ -1.44
CDH13P55290 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH13P55290 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH13P55290 RPS7P14-201ENST00000426405 583 ntBASIC6.08□□□□□ -1.44
CDH13P55290 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 GTF3AP6-201ENST00000432585 986 ntBASIC6.08□□□□□ -1.44
CDH13P55290 AC016908.1-201ENST00000442571 1219 ntBASIC6.08□□□□□ -1.44
CDH13P55290 MTCYBP14-201ENST00000457471 715 ntBASIC6.08□□□□□ -1.44
CDH13P55290 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 AC122714.1-201ENST00000502510 459 ntBASIC6.08□□□□□ -1.44
CDH13P55290 AC008945.1-201ENST00000505144 499 ntBASIC6.08□□□□□ -1.44
CDH13P55290 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 RPA2P3-201ENST00000533268 770 ntBASIC6.08□□□□□ -1.44
CDH13P55290 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH13P55290 AC092865.1-201ENST00000544395 1023 ntBASIC6.08□□□□□ -1.44
CDH13P55290 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH13P55290 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH13P55290 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.08□□□□□ -1.44
CDH13P55290 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 AC138473.1-201ENST00000605717 526 ntBASIC6.08□□□□□ -1.44
CDH13P55290 AC139792.1-201ENST00000607051 647 ntBASIC6.08□□□□□ -1.44
CDH13P55290 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 AC073389.3-201ENST00000609434 935 ntBASIC6.08□□□□□ -1.44
CDH13P55290 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 MTCO1P1-201ENST00000624263 1081 ntBASIC6.08□□□□□ -1.44
CDH13P55290 OR7E91P-202ENST00000642062 1198 ntBASIC6.08□□□□□ -1.44
CDH13P55290 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 NCOA4P2-201ENST00000340589 1813 ntBASIC6.08□□□□□ -1.44
CDH13P55290 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms