Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDH6P55285 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
CDH6P55285 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 AL139805.1-201ENST00000407837 289 ntBASIC6.4□□□□□ -1.38
CDH6P55285 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH6P55285 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH6P55285 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH6P55285 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH6P55285 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 RPL7AP51-201ENST00000422016 760 ntBASIC6.4□□□□□ -1.38
CDH6P55285 VN1R20P-201ENST00000425215 966 ntBASIC6.4□□□□□ -1.38
CDH6P55285 AC016027.5-201ENST00000427227 210 ntBASIC6.4□□□□□ -1.38
CDH6P55285 AL354707.3-201ENST00000427308 331 ntBASIC6.4□□□□□ -1.38
CDH6P55285 AL645936.1-201ENST00000441979 518 ntBASIC6.4□□□□□ -1.38
CDH6P55285 AL355032.1-201ENST00000472981 438 ntBASIC6.4□□□□□ -1.38
CDH6P55285 RN7SL836P-201ENST00000476140 296 ntBASIC6.4□□□□□ -1.38
CDH6P55285 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH6P55285 RN7SKP248-201ENST00000516278 305 ntBASIC6.4□□□□□ -1.38
CDH6P55285 NATP-201ENST00000523491 878 ntBASIC6.4□□□□□ -1.38
CDH6P55285 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH6P55285 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH6P55285 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH6P55285 WBP1LP12-201ENST00000604449 331 ntBASIC6.4□□□□□ -1.38
CDH6P55285 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH6P55285 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH6P55285 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH6P55285 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.4□□□□□ -1.39
CDH6P55285 EIF3EP1-201ENST00000433978 1316 ntBASIC6.4□□□□□ -1.39
CDH6P55285 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CDH6P55285 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH6P55285 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CDH6P55285 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CDH6P55285 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CDH6P55285 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH6P55285 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.4□□□□□ -1.39
CDH6P55285 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.4□□□□□ -1.39
CDH6P55285 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CDH6P55285 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH6P55285 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
CDH6P55285 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CDH6P55285 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CDH6P55285 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CDH6P55285 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CDH6P55285 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH6P55285 RNA5SP198-201ENST00000410376 127 ntBASIC6.39□□□□□ -1.39
CDH6P55285 RN7SKP144-201ENST00000411108 279 ntBASIC6.39□□□□□ -1.39
CDH6P55285 MTND4LP17-201ENST00000414607 293 ntBASIC6.39□□□□□ -1.39
CDH6P55285 AC015977.1-201ENST00000418887 292 ntBASIC6.39□□□□□ -1.39
CDH6P55285 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH6P55285 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH6P55285 AC013403.1-201ENST00000436954 263 ntBASIC6.39□□□□□ -1.39
CDH6P55285 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH6P55285 RAB28P2-201ENST00000454299 641 ntBASIC6.39□□□□□ -1.39
CDH6P55285 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH6P55285 AC044810.1-201ENST00000480271 711 ntBASIC6.39□□□□□ -1.39
CDH6P55285 RPL34P33-201ENST00000486062 334 ntBASIC6.39□□□□□ -1.39
CDH6P55285 RPL29P23-201ENST00000486188 442 ntBASIC6.39□□□□□ -1.39
CDH6P55285 MTND6P8-201ENST00000503471 522 ntBASIC6.39□□□□□ -1.39
CDH6P55285 AC008945.1-201ENST00000505144 499 ntBASIC6.39□□□□□ -1.39
CDH6P55285 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH6P55285 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH6P55285 AC095052.1-201ENST00000509955 863 ntBASIC6.39□□□□□ -1.39
CDH6P55285 GUSBP9-201ENST00000510138 584 ntBASIC6.39□□□□□ -1.39
CDH6P55285 AC116917.1-201ENST00000520558 305 ntBASIC6.39□□□□□ -1.39
CDH6P55285 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH6P55285 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH6P55285 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH6P55285 RN7SL230P-201ENST00000580835 303 ntBASIC6.39□□□□□ -1.39
CDH6P55285 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH6P55285 AC008555.7-201ENST00000605008 583 ntBASIC6.39□□□□□ -1.39
CDH6P55285 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 AC034229.2-201ENST00000566945 2508 ntBASIC6.39□□□□□ -1.39
CDH6P55285 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH6P55285 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH6P55285 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH6P55285 AKAP17BP-201ENST00000431706 2719 ntBASIC6.39□□□□□ -1.39
CDH6P55285 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms