Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGCS2P54868 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 RNA5SP375-201ENST00000362975 119 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
HMGCS2P54868 RPL35AP3-201ENST00000414680 288 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 AC016769.2-201ENST00000414815 475 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.09□□□□□ -1.27
HMGCS2P54868 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 GEMIN2P1-201ENST00000454246 752 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 RPS27AP2-201ENST00000457576 465 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 AL122020.1-201ENST00000472287 459 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 TMEM97P2-201ENST00000517841 403 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 AC073916.1-201ENST00000545095 130 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGCS2P54868 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 RPL12P48-201ENST00000605620 304 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 AL137067.2-201ENST00000621202 131 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
HMGCS2P54868 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
HMGCS2P54868 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
HMGCS2P54868 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGCS2P54868 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.09□□□□□ -1.28
HMGCS2P54868 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
HMGCS2P54868 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 TNPO1P2-201ENST00000426249 2665 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGCS2P54868 SHQ1P1-201ENST00000437111 1544 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 BIN2P1-201ENST00000504996 1530 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 GNL2P1-201ENST00000451274 2190 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 AP001541.1-201ENST00000623322 1904 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 RPS3AP2-201ENST00000407190 754 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGCS2P54868 MARK2P12-201ENST00000420129 585 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 BX510359.3-201ENST00000422168 306 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGCS2P54868 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AL121776.1-201ENST00000429337 372 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 GAPDHP48-201ENST00000436626 961 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 AL512593.1-201ENST00000444758 779 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 RPSAP37-201ENST00000470913 821 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AL136038.1-201ENST00000497246 351 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.08□□□□□ -1.28
HMGCS2P54868 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
HMGCS2P54868 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC141002.1-201ENST00000607025 279 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 AL136131.3-201ENST00000607600 188 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 AC096861.1-201ENST00000616652 240 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 AC013488.1-201ENST00000526618 1838 ntBASIC7.08□□□□□ -1.28
HMGCS2P54868 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGCS2P54868 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGCS2P54868 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGCS2P54868 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGCS2P54868 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HMGCS2P54868 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
HMGCS2P54868 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HMGCS2P54868 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGCS2P54868 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 OR13C1P-202ENST00000641378 2919 ntBASIC7.07□□□□□ -1.28
HMGCS2P54868 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGCS2P54868 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms