Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 GNL2P1-201ENST00000451274 2190 ntBASIC8.57□□□□□ -1.04
MSH6P52701 AC127070.3-201ENST00000503695 3263 ntBASIC8.57□□□□□ -1.04
MSH6P52701 NEK2P4-201ENST00000425793 1329 ntBASIC8.57□□□□□ -1.04
MSH6P52701 AL512310.3-201ENST00000547023 1335 ntBASIC8.57□□□□□ -1.04
MSH6P52701 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.56□□□□□ -1.04
MSH6P52701 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 MRRFP1-201ENST00000435941 1675 ntBASIC8.56□□□□□ -1.04
MSH6P52701 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
MSH6P52701 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.56□□□□□ -1.04
MSH6P52701 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
MSH6P52701 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC8.56□□□□□ -1.04
MSH6P52701 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.56□□□□□ -1.04
MSH6P52701 RN7SKP124-201ENST00000364730 341 ntBASIC8.56□□□□□ -1.04
MSH6P52701 RPL35AP3-201ENST00000414680 288 ntBASIC8.56□□□□□ -1.04
MSH6P52701 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.56□□□□□ -1.04
MSH6P52701 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.56□□□□□ -1.04
MSH6P52701 RN7SL184P-201ENST00000488308 297 ntBASIC8.56□□□□□ -1.04
MSH6P52701 AC109481.1-201ENST00000509173 282 ntBASIC8.56□□□□□ -1.04
MSH6P52701 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.56□□□□□ -1.04
MSH6P52701 OR4A46P-201ENST00000527255 933 ntBASIC8.56□□□□□ -1.04
MSH6P52701 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.56□□□□□ -1.04
MSH6P52701 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.56□□□□□ -1.04
MSH6P52701 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC8.56□□□□□ -1.04
MSH6P52701 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.56□□□□□ -1.04
MSH6P52701 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.56□□□□□ -1.04
MSH6P52701 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.56□□□□□ -1.04
MSH6P52701 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 AC012254.3-201ENST00000591183 2117 ntBASIC8.56□□□□□ -1.04
MSH6P52701 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.56□□□□□ -1.04
MSH6P52701 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH6P52701 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
MSH6P52701 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.55□□□□□ -1.04
MSH6P52701 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
MSH6P52701 PABPC1P6-201ENST00000445594 1829 ntBASIC8.55□□□□□ -1.04
MSH6P52701 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
MSH6P52701 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
MSH6P52701 HMGB1P20-201ENST00000402555 677 ntBASIC8.55□□□□□ -1.04
MSH6P52701 AL133270.1-201ENST00000402635 279 ntBASIC8.55□□□□□ -1.04
MSH6P52701 MIR1286-201ENST00000408112 78 ntBASIC8.55□□□□□ -1.04
MSH6P52701 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 RN7SL269P-201ENST00000467795 305 ntBASIC8.55□□□□□ -1.04
MSH6P52701 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.55□□□□□ -1.04
MSH6P52701 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.55□□□□□ -1.04
MSH6P52701 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC8.55□□□□□ -1.04
MSH6P52701 HIGD1AP5-201ENST00000529959 259 ntBASIC8.55□□□□□ -1.04
MSH6P52701 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.55□□□□□ -1.04
MSH6P52701 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.55□□□□□ -1.04
MSH6P52701 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 AC012653.2-201ENST00000621880 420 ntBASIC8.55□□□□□ -1.04
MSH6P52701 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.55□□□□□ -1.04
MSH6P52701 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
MSH6P52701 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MSH6P52701 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.54□□□□□ -1.04
MSH6P52701 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
MSH6P52701 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.54□□□□□ -1.04
MSH6P52701 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 AC062022.1-201ENST00000451026 1684 ntBASIC8.54□□□□□ -1.04
MSH6P52701 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 AL645927.1-201ENST00000396783 406 ntBASIC8.54□□□□□ -1.04
MSH6P52701 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.54□□□□□ -1.04
MSH6P52701 FMO7P-201ENST00000436045 768 ntBASIC8.54□□□□□ -1.04
MSH6P52701 ELOCP3-201ENST00000439303 348 ntBASIC8.54□□□□□ -1.04
MSH6P52701 AC091965.3-201ENST00000506236 208 ntBASIC8.54□□□□□ -1.04
MSH6P52701 RNA5SP92-201ENST00000516437 110 ntBASIC8.54□□□□□ -1.04
MSH6P52701 IGHV3-57-201ENST00000520143 280 ntBASIC8.54□□□□□ -1.04
MSH6P52701 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.54□□□□□ -1.04
MSH6P52701 FAM27E4-201ENST00000605259 342 ntBASIC8.54□□□□□ -1.04
MSH6P52701 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 AC079753.1-201ENST00000623243 3868 ntBASIC8.54□□□□□ -1.04
MSH6P52701 NEK2P2-201ENST00000438441 1338 ntBASIC8.54□□□□□ -1.04
MSH6P52701 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.54□□□□□ -1.04
MSH6P52701 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
MSH6P52701 AL596244.1-201ENST00000567068 3779 ntBASIC8.54□□□□□ -1.04
MSH6P52701 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
MSH6P52701 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH6P52701 AL133243.4-201ENST00000623116 3109 ntBASIC8.54□□□□□ -1.04
MSH6P52701 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
MSH6P52701 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms